Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28a18
(339 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF113248-1|AAF21966.1| 307|Homo sapiens heart specific serine p... 29 2.8
BC069271-1|AAH69271.1| 454|Homo sapiens KLHL29 protein protein. 29 3.7
BC110451-1|AAI10452.1| 1042|Homo sapiens corin, serine peptidase... 29 4.8
AF133845-1|AAD31850.1| 1042|Homo sapiens corin protein. 29 4.8
DQ139833-1|AAZ73162.1| 1235|Homo sapiens GrinchGEF protein. 28 8.5
BC117171-1|AAI17172.1| 1240|Homo sapiens Rho guanine nucleotide ... 28 8.5
BC080596-1|AAH80596.1| 886|Homo sapiens ARHGEF10L protein protein. 28 8.5
BC065561-1|AAH65561.1| 832|Homo sapiens ARHGEF10L protein protein. 28 8.5
BC021726-1|AAH21726.2| 383|Homo sapiens SAMD4A protein protein. 28 8.5
AL358593-3|CAH74137.1| 1052|Homo sapiens Rho guanine nucleotide ... 28 8.5
AL358593-2|CAH74136.1| 1240|Homo sapiens Rho guanine nucleotide ... 28 8.5
AL358593-1|CAH74135.1| 1279|Homo sapiens Rho guanine nucleotide ... 28 8.5
AL139250-2|CAI22140.1| 1240|Homo sapiens Rho guanine nucleotide ... 28 8.5
AL139250-1|CAI22139.1| 1279|Homo sapiens Rho guanine nucleotide ... 28 8.5
AK092020-1|BAC03792.1| 633|Homo sapiens protein ( Homo sapiens ... 28 8.5
AK001383-1|BAA91663.1| 596|Homo sapiens protein ( Homo sapiens ... 28 8.5
AB046846-1|BAB13452.1| 1284|Homo sapiens KIAA1626 protein protein. 28 8.5
>AF113248-1|AAF21966.1| 307|Homo sapiens heart specific serine
proteinase protein.
Length = 307
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 111 QAQASSFVCSCVLVMKKCVWSQVHTC*GAEAVGYR 215
Q++ S +C CVL+ KK V + H G E R
Sbjct: 87 QSEPSGHICGCVLIAKKWVLTVAHCFEGRENAAVR 121
>BC069271-1|AAH69271.1| 454|Homo sapiens KLHL29 protein protein.
Length = 454
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 181 TPVEAPRPWDTDHSAGKNMRKN 246
TP+ PWDTD K MR++
Sbjct: 145 TPINQSTPWDTDEPPSKQMRES 166
>BC110451-1|AAI10452.1| 1042|Homo sapiens corin, serine peptidase
protein.
Length = 1042
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 111 QAQASSFVCSCVLVMKKCVWSQVHTC*GAE 200
Q++ S +C CVL+ KK V + H G E
Sbjct: 820 QSEPSGHICGCVLIAKKWVLTVAHCFEGRE 849
>AF133845-1|AAD31850.1| 1042|Homo sapiens corin protein.
Length = 1042
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 111 QAQASSFVCSCVLVMKKCVWSQVHTC*GAE 200
Q++ S +C CVL+ KK V + H G E
Sbjct: 820 QSEPSGHICGCVLIAKKWVLTVAHCFEGRE 849
>DQ139833-1|AAZ73162.1| 1235|Homo sapiens GrinchGEF protein.
Length = 1235
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 800 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 830
>BC117171-1|AAI17172.1| 1240|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 10-like protein.
Length = 1240
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 805 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 835
>BC080596-1|AAH80596.1| 886|Homo sapiens ARHGEF10L protein protein.
Length = 886
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 451 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 481
>BC065561-1|AAH65561.1| 832|Homo sapiens ARHGEF10L protein protein.
Length = 832
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 397 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 427
>BC021726-1|AAH21726.2| 383|Homo sapiens SAMD4A protein protein.
Length = 383
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 189 NRCAPETRRTFSLQAHTSKQNYLPVLENDALIHSSL 82
+R +RT SL HTS QN L + + +HS L
Sbjct: 283 SRTHSSVQRTRSLPVHTSPQNMLMFQQPGSQVHSGL 318
>AL358593-3|CAH74137.1| 1052|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 10-like protein.
Length = 1052
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 617 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 647
>AL358593-2|CAH74136.1| 1240|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 10-like protein.
Length = 1240
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 805 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 835
>AL358593-1|CAH74135.1| 1279|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 10-like protein.
Length = 1279
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 844 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 874
>AL139250-2|CAI22140.1| 1240|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 10-like protein.
Length = 1240
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 805 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 835
>AL139250-1|CAI22139.1| 1279|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 10-like protein.
Length = 1279
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 844 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 874
>AK092020-1|BAC03792.1| 633|Homo sapiens protein ( Homo sapiens
cDNA FLJ34701 fis, clone MESAN2002724, weakly similar to
Rho guanine nucleotide exchange factor (GEF) 10. ).
Length = 633
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 547 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 577
>AK001383-1|BAA91663.1| 596|Homo sapiens protein ( Homo sapiens
cDNA FLJ10521 fis, clone NT2RP2000841. ).
Length = 596
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 368 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 398
>AB046846-1|BAB13452.1| 1284|Homo sapiens KIAA1626 protein protein.
Length = 1284
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 192 LNRCAPETRRTFSLQAHTSKQNYLPVLENDA 100
LNR +P T ++F L A Y+P LE +A
Sbjct: 849 LNRPSPRTVKSFPLAAPVLCMEYIPELEEEA 879
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,968,422
Number of Sequences: 237096
Number of extensions: 876155
Number of successful extensions: 1283
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -