Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28a15
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.70 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.70 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.1  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   2.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.7  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +2

Query: 341 RRGLALGDIFFRDATRDL 394
           RR L L DI   DATRDL
Sbjct: 325 RRSLYLSDIPLHDATRDL 342


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +2

Query: 341 RRGLALGDIFFRDATRDL 394
           RR L L DI   DATRDL
Sbjct: 325 RRSLYLSDIPLHDATRDL 342


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 319 DPMIVVAFSITSSILSSPTCSRAITLTEAEE 227
           DP+  +  S   S+ +SP C     LT  EE
Sbjct: 29  DPVKSLVCSPDLSVFTSPACGSETPLTNIEE 59


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 552 QRNPRNEVAHSEELSSGKC 608
           +RNPR+ V  + E++S  C
Sbjct: 323 ERNPRSAVLAAREITSSSC 341


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 344 RGLALGDIFFRDATRDL 394
           RGL + DI   DATRD+
Sbjct: 406 RGLFISDIPLHDATRDV 422


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 151 LFDRIVCV*QVLSSHQSWYQEGQHQHVES 65
           +FD ++ V Q   S   WY  G++  +ES
Sbjct: 39  IFDLLLYVRQADLSDAEWYDVGRNYDMES 67


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 151 LFDRIVCV*QVLSSHQSWYQEGQHQHVES 65
           +FD ++ V Q   S   WY  G++  +ES
Sbjct: 39  IFDLLLYVRQADLSDAEWYDVGRNYDMES 67


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 519  QSQCPLASQSQTVQPMHQSTGGQPSLKLDSYG 424
            QSQ P   Q Q  Q   Q    QP  +   YG
Sbjct: 1520 QSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYG 1551


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,870
Number of Sequences: 438
Number of extensions: 4557
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)