Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28a11
(274 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1384 + 26177053-26177227,26178754-26178823,26179427-261794... 30 0.22
03_06_0415 - 33775143-33775305,33775438-33775565,33775654-337757... 29 0.38
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 28 0.89
07_03_1121 - 24130451-24130462,24130827-24131255 28 1.2
05_04_0293 - 19898254-19898819,19899698-19899701 28 1.2
09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 27 1.5
06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186... 27 2.0
03_05_0931 - 28912700-28913056,28913245-28913319,28913424-289134... 27 2.7
03_01_0257 + 1994645-1995061 27 2.7
02_02_0084 + 6637145-6638677 27 2.7
02_02_0478 - 10771533-10771876,10772924-10772987 26 3.6
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 26 4.7
04_04_0050 - 22360294-22361804,22362087-22362378,22363367-223634... 26 4.7
09_04_0071 - 14313737-14315091,14316131-14316207,14316604-143167... 25 6.3
08_02_1146 + 24678142-24678258,24678550-24678587,24678997-246790... 25 6.3
08_02_0590 + 19044193-19044364,19044464-19045047,19045085-190460... 25 6.3
05_03_0080 - 8245082-8246656,8246657-8246935,8247502-8247513 25 6.3
03_01_0151 + 1206555-1206998,1207112-1207543 25 6.3
01_03_0038 + 11862743-11862884,11863145-11863704,11863733-118637... 25 6.3
10_07_0016 + 11826066-11826773 25 8.3
06_01_0130 - 1010901-1011932,1012627-1012913,1013516-1013606 25 8.3
03_01_0533 - 3984158-3984364,3984541-3984711,3985158-3985226,398... 25 8.3
02_05_0049 - 25423260-25423344,25423415-25423483,25424143-254242... 25 8.3
>07_03_1384 +
26177053-26177227,26178754-26178823,26179427-26179469,
26179888-26179965,26180010-26180027,26180103-26180187,
26180273-26180355,26180489-26180546,26181258-26181368,
26181769-26181826,26182005-26182101,26182585-26182620,
26183107-26183137,26183993-26184046,26184159-26184301,
26184411-26184560,26185084-26185317,26185450-26185509,
26185974-26186204,26186829-26186981
Length = 655
Score = 30.3 bits (65), Expect = 0.22
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +2
Query: 146 ILLQSCVLHAALWYVTNMKIAVLRKKSRPMETAERRRVAPK 268
+L+ +C+ +WY +N + + P + ++RR PK
Sbjct: 582 LLMSACISMGIIWYKSNQRTQTTEDGAPPKDKTKKRRPRPK 622
>03_06_0415 -
33775143-33775305,33775438-33775565,33775654-33775761,
33775809-33775909,33776265-33776805,33777290-33777847
Length = 532
Score = 29.5 bits (63), Expect = 0.38
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 214 PKKKSADGNSGAEEGGS 264
PKK++ DG+SG E+GGS
Sbjct: 214 PKKRTLDGDSGDEDGGS 230
>03_02_1023 +
13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 28.3 bits (60), Expect = 0.89
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 115 INSAPSSICLYFTTIMCTPCGPMVCYKYEDCGPPKKKSADGNS 243
I+ ++C Y+ ++CT + + PPKK+ A G S
Sbjct: 589 ISGVRMNVCFYYLELLCTTAMSYKVF-LKSIRPPKKRPAQGTS 630
>07_03_1121 - 24130451-24130462,24130827-24131255
Length = 146
Score = 27.9 bits (59), Expect = 1.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 244 RCFHRPTFFSEDRNLHICNIP 182
RC + F SEDR H+C P
Sbjct: 54 RCIVQVRFVSEDRRCHVCRAP 74
>05_04_0293 - 19898254-19898819,19899698-19899701
Length = 189
Score = 27.9 bits (59), Expect = 1.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 131 PPFACILLQSCVLHAAL 181
PP AC +LQ C LH+ L
Sbjct: 82 PPLACAILQECELHSYL 98
>09_04_0308 + 16567361-16568854,16568946-16569068,16569372-16569649,
16570316-16571924,16572363-16573781
Length = 1640
Score = 27.5 bits (58), Expect = 1.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 201 RLRSSEKKVGRWKQRSGG 254
R RSS ++ GRW++R GG
Sbjct: 1263 RRRSSRRRSGRWRRRVGG 1280
>06_03_0927 +
26015956-26018230,26018323-26018471,26018550-26018618,
26018701-26018853,26018927-26019090,26019207-26019354,
26020348-26020470,26020560-26020647,26020781-26020950
Length = 1112
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 215 GGPQSSYL*HTIGPHGV 165
GGP SSY+ T+GP GV
Sbjct: 606 GGPYSSYVVATVGPGGV 622
>03_05_0931 -
28912700-28913056,28913245-28913319,28913424-28913497,
28913604-28913691,28913785-28913936,28914050-28914209,
28914303-28914458,28914566-28914784,28915390-28915650,
28917183-28917389,28917488-28917619
Length = 626
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 169 PCGPMVCYKYEDCGPPKKKSADGNSGAEEGGS 264
PC + K D PP +S+ G+SG+ GG+
Sbjct: 539 PCN--MSRKRVDAAPPSVRSSSGSSGSSGGGA 568
>03_01_0257 + 1994645-1995061
Length = 138
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 151 TTIMCTPCGPMVCYKYEDCGPP 216
T I C CG ++ Y Y+D GPP
Sbjct: 77 TRISCDACGRLLGYVYDD-GPP 97
>02_02_0084 + 6637145-6638677
Length = 510
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 211 PPKKKSADGNSGAEEGGSK 267
PP+ S DGN GA G SK
Sbjct: 3 PPRANSGDGNDGAVGGQSK 21
>02_02_0478 - 10771533-10771876,10772924-10772987
Length = 135
Score = 26.2 bits (55), Expect = 3.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 163 CTPCGPMVCYKYEDCGPPK 219
C P G C Y++C PP+
Sbjct: 31 CAPAGVNHCEFYDECAPPR 49
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 178 PMVCYKYEDCGPPKKKSADGNSGAEEGGSKKK 273
P ++ + PPK+KS DG + A KK
Sbjct: 236 PSTSLEHSESPPPKRKSLDGRTPASSTKKGKK 267
>04_04_0050 -
22360294-22361804,22362087-22362378,22363367-22363420,
22363627-22363718,22364713-22364915,22365892-22366133,
22366205-22366330,22366800-22366907,22367394-22367457,
22367543-22367681,22367867-22368038,22368198-22368482
Length = 1095
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 52 IYKNIFYRKITSD 90
++KNIFY+K TSD
Sbjct: 337 LFKNIFYKKATSD 349
>09_04_0071 -
14313737-14315091,14316131-14316207,14316604-14316725,
14316838-14316924,14317000-14317066,14317135-14317290,
14318689-14318837
Length = 670
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +1
Query: 124 APSSICLYFTTIMCTPCGPMVCYKYE---DCGPPKKKSADGNS 243
APS C C+ CG M+C+ + +CG K S
Sbjct: 169 APSDACCIENVDNCSTCGNMLCHWHNHKMNCGGTYTKMGTSTS 211
>08_02_1146 +
24678142-24678258,24678550-24678587,24678997-24679012,
24679874-24680002,24680073-24680229,24680337-24680530,
24680668-24680916,24681196-24681309,24681949-24681990,
24682402-24682572,24682932-24683104,24683378-24683624,
24684046-24684130,24684401-24684510,24684714-24684977,
24685885-24685950,24686431-24686525,24686780-24686858
Length = 781
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 245 PLFPSADFFFGGPQSSYL*HTIGPHGVHMIVVKYRQMEEGAEFIFHS 105
PL ADF GGP ++ + P G+ V Q++E E IF+S
Sbjct: 97 PLARGADFIRGGPSHDWV-ESFRPPGLPEFAVPDAQLKE-FEQIFNS 141
>08_02_0590 +
19044193-19044364,19044464-19045047,19045085-19046059,
19046219-19046605
Length = 705
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 202 DCGPPKKKSADGNSGAEEGGSKKK 273
D PP+ +ADG G+ EG S+ +
Sbjct: 98 DALPPRPVAADGRGGSGEGTSRAR 121
>05_03_0080 - 8245082-8246656,8246657-8246935,8247502-8247513
Length = 621
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 44 CEKYIKIYFIEKLQVIFTNFMSEK*IQLPPPFACILLQSCVLHAAL 181
CEKY+K IE + + + K + L CIL C+ H A+
Sbjct: 210 CEKYVKAKIIELELSMMYDILYTKAMILQTWIGCIL--RCISHIAM 253
>03_01_0151 + 1206555-1206998,1207112-1207543
Length = 291
Score = 25.4 bits (53), Expect = 6.3
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 131 PPFACI-LLQSCVLHAALWYVTNMKIAVLRKKSRPMETAERRRVAP 265
PP A + LL+SCV AA VT R++ RP R R AP
Sbjct: 59 PPVADLDLLESCVTQAAAPPVTAPATRAERRRKRP---RPRPRAAP 101
>01_03_0038 +
11862743-11862884,11863145-11863704,11863733-11863777,
11864174-11864563
Length = 378
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 207 RSSEKKVGRWKQRSGGGWLQKK 272
R E VG W +R GGW K
Sbjct: 346 RDREISVGGWGRRENGGWQGSK 367
>10_07_0016 + 11826066-11826773
Length = 235
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 131 PPFACILLQSCVLHAALWYVTNMKIAVLRKKSRPMETAERRRVAPKKK 274
PP C+ V L + + AVL + RP T RRR P+ +
Sbjct: 161 PPVTCV-----VADHLLGFSLDASAAVLASRCRPPPTPARRRPPPRPR 203
>06_01_0130 - 1010901-1011932,1012627-1012913,1013516-1013606
Length = 469
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +1
Query: 151 TTIMCTPCGPMVCYKYED-CGPPKKKSADG 237
T + C+PC CY +D P K S+ G
Sbjct: 155 TWVQCSPCPTPPCYPQKDVLYDPTKSSSSG 184
>03_01_0533 -
3984158-3984364,3984541-3984711,3985158-3985226,
3985316-3985428,3985586-3985723,3987090-3987111
Length = 239
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = -3
Query: 263 EPPSSAPL---FPSADFFFGGPQSSYL*HTI 180
EP S P +P AD F+GG ++Y H I
Sbjct: 84 EPDRSQPFGISYPYADSFYGGAVATYGTHAI 114
>02_05_0049 -
25423260-25423344,25423415-25423483,25424143-25424231,
25424315-25424407,25424516-25424594,25425557-25425657,
25425864-25425944,25426369-25426740
Length = 322
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 136 ICLYFTTIMCTPCGPMVCYKYEDCGPPKKKSA 231
+CL+F I C P G C CG + A
Sbjct: 63 VCLFFLDISCAPLGLTPC-GARGCGQSRNAQA 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,616,539
Number of Sequences: 37544
Number of extensions: 165429
Number of successful extensions: 500
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 256259052
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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