Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28a11
(274 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68493-13|CAA92787.2| 230|Caenorhabditis elegans Hypothetical p... 30 0.26
AF067611-3|AAC19179.1| 139|Caenorhabditis elegans Hypothetical ... 27 2.4
U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 26 3.2
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z83230-5|CAB05745.1| 304|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z81075-1|CAB03046.1| 49|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z29121-6|CAH19096.1| 405|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z29121-5|CAD54174.2| 403|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z22180-12|CAH19086.1| 405|Caenorhabditis elegans Hypothetical p... 25 5.5
Z22180-11|CAD54147.2| 403|Caenorhabditis elegans Hypothetical p... 25 5.5
U41547-6|AAA83197.1| 139|Caenorhabditis elegans Hypothetical pr... 25 5.5
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 25 5.5
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 25 5.5
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 25 5.5
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal... 25 5.5
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal... 25 5.5
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 25 7.3
AL110485-31|CAB60352.2| 280|Caenorhabditis elegans Hypothetical... 25 7.3
AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical ... 25 7.3
AF016424-6|AAB65333.1| 366|Caenorhabditis elegans Transforming ... 25 7.3
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z48055-4|CAA88132.2| 301|Caenorhabditis elegans Hypothetical pr... 25 9.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 25 9.7
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p... 25 9.7
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 25 9.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 25 9.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 25 9.7
AL110485-30|CAI79250.1| 287|Caenorhabditis elegans Hypothetical... 25 9.7
AF016418-8|AAK18897.1| 330|Caenorhabditis elegans Serpentine re... 25 9.7
>Z68493-13|CAA92787.2| 230|Caenorhabditis elegans Hypothetical
protein C33A12.3 protein.
Length = 230
Score = 29.9 bits (64), Expect = 0.26
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -3
Query: 266 LEPPSSAPL---FPSADFFFGGPQSSYL*HTIGPHG 168
L+PP P F +FFF + YL IGPHG
Sbjct: 77 LDPPGITPQLWDFEVIEFFFANDRGQYLEVEIGPHG 112
>AF067611-3|AAC19179.1| 139|Caenorhabditis elegans Hypothetical
protein C45G7.3 protein.
Length = 139
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 196 YEDCGPPKKKSADGNSGA 249
YEDCG P KKS + A
Sbjct: 55 YEDCGQPTKKSGETTEAA 72
>U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical
protein F57F4.2 protein.
Length = 327
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +1
Query: 175 GPMVCYKYE-DCGPPKK---KSADGNSGAEEGGSKKK 273
GP Y+ + D G KK +S DG+ G EEG KK+
Sbjct: 90 GPGKLYRAKKDDGQEKKGDPQSRDGDEGEEEGSDKKE 126
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical
protein C41A3.1 protein.
Length = 7829
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 187 CYKYEDCGPPKKKSADGNSGA 249
CY Y+D PP + A GNS +
Sbjct: 116 CYDYKDLLPPDQYMATGNSAS 136
>Z83230-5|CAB05745.1| 304|Caenorhabditis elegans Hypothetical
protein F56A8.5 protein.
Length = 304
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = -1
Query: 271 FFWSHPPPLRCFHRPTFFSEDRNLHICNIP 182
F W PP C HR +R +C P
Sbjct: 71 FEWKFVPPTSCHHRTIIRKLNRKTALCQNP 100
>Z81075-1|CAB03046.1| 49|Caenorhabditis elegans Hypothetical
protein F35C12.1 protein.
Length = 49
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 214 PKKKSADGNSGAEEGGSKKK 273
P+ DGNSG EE SK+K
Sbjct: 30 PETDEVDGNSGFEEKKSKRK 49
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 127 PSSICLYFTTIMCTPCGPMVCYKYEDCGPPKKKSADGNSG 246
P ++C T CTPC P + GPP GN G
Sbjct: 132 PPAVCEEITEPPCTPCPP------GEPGPPGPPGDAGNPG 165
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 202 DCGPPKKKSADGNSGAEEG 258
DCGPP +DG G+ G
Sbjct: 233 DCGPPGAPGSDGKPGSPGG 251
>Z29121-6|CAH19096.1| 405|Caenorhabditis elegans Hypothetical
protein ZK757.4b protein.
Length = 405
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 114 FSLIKLVKITCNFSIKYIFIYFSH 43
F L+ L+ ++C FS+ F++F H
Sbjct: 239 FPLVFLLFLSCMFSLSLSFLFFYH 262
>Z29121-5|CAD54174.2| 403|Caenorhabditis elegans Hypothetical
protein ZK757.4a protein.
Length = 403
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 114 FSLIKLVKITCNFSIKYIFIYFSH 43
F L+ L+ ++C FS+ F++F H
Sbjct: 237 FPLVFLLFLSCMFSLSLSFLFFYH 260
>Z22180-12|CAH19086.1| 405|Caenorhabditis elegans Hypothetical
protein ZK757.4b protein.
Length = 405
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 114 FSLIKLVKITCNFSIKYIFIYFSH 43
F L+ L+ ++C FS+ F++F H
Sbjct: 239 FPLVFLLFLSCMFSLSLSFLFFYH 262
>Z22180-11|CAD54147.2| 403|Caenorhabditis elegans Hypothetical
protein ZK757.4a protein.
Length = 403
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 114 FSLIKLVKITCNFSIKYIFIYFSH 43
F L+ L+ ++C FS+ F++F H
Sbjct: 237 FPLVFLLFLSCMFSLSLSFLFFYH 260
>U41547-6|AAA83197.1| 139|Caenorhabditis elegans Hypothetical
protein F22A3.6a protein.
Length = 139
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 196 YEDCGPPKKKSADGNSGA 249
YEDCG P KK+ + A
Sbjct: 55 YEDCGQPTKKAGETTEAA 72
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 202 DCGPPKKKSADGNSGAEEG 258
DCGPP +DG G+ G
Sbjct: 233 DCGPPGAPGSDGKPGSPGG 251
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 151 TTIMCTPCGPMVCYKYEDCGPPKKKSADGNSGAEEG 258
T I+ T G E+ K++ DG SGAEEG
Sbjct: 254 TGIIMTLLGAAKTVAEEERKTAKREGGDGASGAEEG 289
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform b protein.
Length = 1234
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 151 TTIMCTPCGPMVCYKYEDCGPPKKKSADGNSGAEEG 258
T I+ T G E+ K++ DG SGAEEG
Sbjct: 254 TGIIMTLLGAAKTVAEEERKTAKREGGDGASGAEEG 289
>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform a protein.
Length = 1160
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 151 TTIMCTPCGPMVCYKYEDCGPPKKKSADGNSGAEEG 258
T I+ T G E+ K++ DG SGAEEG
Sbjct: 254 TGIIMTLLGAAKTVAEEERKTAKREGGDGASGAEEG 289
>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform c protein.
Length = 1137
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 151 TTIMCTPCGPMVCYKYEDCGPPKKKSADGNSGAEEG 258
T I+ T G E+ K++ DG SGAEEG
Sbjct: 254 TGIIMTLLGAAKTVAEEERKTAKREGGDGASGAEEG 289
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 193 KYEDCGPPKKKSADG 237
KYEDC P K++A+G
Sbjct: 125 KYEDCWPAIKENAEG 139
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 193 KYEDCGPPKKKSADGNSGAEEGGSKKK 273
K +D G KKK A+ + G KKK
Sbjct: 432 KKKDAGDEKKKDAEDEKKKDAGDEKKK 458
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +1
Query: 208 GPPKKKSADGNSG--AEEGGSKK 270
GPP + +DGN G + GGS++
Sbjct: 291 GPPGRPGSDGNPGVPGQSGGSRR 313
>AL110485-31|CAB60352.2| 280|Caenorhabditis elegans Hypothetical
protein Y46G5A.7 protein.
Length = 280
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 128 PPPFACILLQSCVLHAALWYVTNMKIAVLRKKSRPMETAERRRVAPKKK 274
P PF + L + VL L Y+ I +LR SR A ++ + K
Sbjct: 4 PAPFHLLKLPTVVLSDVLDYLKISDIFILRATSRKTTCAVKQSIGHANK 52
>AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical
protein T22B11.1 protein.
Length = 472
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 159 HVYSMRPYGMLQI*RLRSSEKKVGRW 236
H Y +R G + I ++SS+KK+ W
Sbjct: 335 HCYLVRGEGSINIESMKSSDKKLYSW 360
>AF016424-6|AAB65333.1| 366|Caenorhabditis elegans Transforming
growth factor betafamily protein 2 protein.
Length = 366
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 181 MVCYKYEDCGPPKKKS 228
++ K ED GPPKK+S
Sbjct: 215 VIALKDEDAGPPKKRS 230
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 179 GPHGVHMIVVKYRQMEEGAEFI 114
GPHGV V + ME+ E++
Sbjct: 240 GPHGVINFAVARKPMEQAVEYV 261
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 130 SSICLYFTTIMCTPCGPMVCYKYEDCGPPKKKSADGNSGAEEGGS 264
S+ C T C PC GPP DGN G+ G S
Sbjct: 136 SAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
>Z48055-4|CAA88132.2| 301|Caenorhabditis elegans Hypothetical
protein T07A5.2 protein.
Length = 301
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 49 KIYKNIFYRKITSD 90
K+YKN YRK T D
Sbjct: 95 KVYKNFIYRKRTKD 108
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 130 SSICLYFTTIMCTPCGPMVCYKYEDCGPPKKKSADGNSGAEEGGS 264
S+ C T C PC GPP DGN G+ G S
Sbjct: 136 SAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
protein C06A5.1 protein.
Length = 1932
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 140 ACILLQSCVLHAALWYVTNMKI 205
A IL C+ HA ++Y N +I
Sbjct: 859 AKILTAECIFHALMYYFDNQRI 880
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defective
protein 45 protein.
Length = 1076
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 208 GPPKKKSADGNSGAEEGGSKKK 273
GPP + + GN+G + GS +K
Sbjct: 1055 GPPPRSNNTGNTGNADSGSWRK 1076
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 130 SSICLYFTTIMCTPCGPMVCYKYEDCGPPKKKSADGNSGAEEGGS 264
S+ C T C PC GPP DGN G+ G S
Sbjct: 136 SAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 130 SSICLYFTTIMCTPCGPMVCYKYEDCGPPKKKSADGNSGAEEGGS 264
S+ C T C PC GPP DGN G+ G S
Sbjct: 136 SAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPS 180
>AL110485-30|CAI79250.1| 287|Caenorhabditis elegans Hypothetical
protein Y46G5A.39 protein.
Length = 287
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 128 PPPFACILLQSCVLHAALWYVTNMKIAVLRKKSRPMETAERRRVAPKKK 274
P PF + L + VL L ++ I +LR SR ++ ++ + KK
Sbjct: 4 PAPFHLLKLPTVVLSDVLDHLKISDICILRATSRKIKFVLKQSIERAKK 52
>AF016418-8|AAK18897.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein169 protein.
Length = 330
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -3
Query: 86 LVIFL*NIFLYIFHT 42
++ F+ +IFLY+FHT
Sbjct: 211 IIFFVVSIFLYLFHT 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,225,846
Number of Sequences: 27780
Number of extensions: 146027
Number of successful extensions: 417
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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