Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28a09
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 143 1e-34
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 138 4e-33
04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 132 3e-31
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 126 2e-29
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 126 2e-29
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 101 7e-22
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 100 2e-21
03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 82 5e-16
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 79 3e-15
12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 77 1e-14
04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 77 1e-14
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 56 3e-08
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 33 0.28
01_05_0027 - 17331888-17331968,17332236-17332806,17333190-173333... 33 0.28
05_06_0027 - 25029725-25030017,25030097-25030211,25030347-250305... 31 1.1
02_01_0555 + 4086434-4087157,4087257-4087943,4088495-4089162 30 1.5
11_08_0091 - 28303446-28303732,28303825-28304297,28304383-283045... 29 2.6
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 29 3.4
05_01_0147 - 981697-983739 29 3.4
11_03_0215 + 11809068-11809300,11809872-11809964,11810976-118111... 29 4.5
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 29 4.5
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 28 6.0
06_03_0933 + 26067109-26067232,26067334-26067486,26068929-260692... 28 6.0
06_01_0785 - 5873244-5873357,5873458-5873562,5874333-5874424,587... 28 6.0
04_04_0964 - 29749624-29749649,29749742-29749945,29750036-297506... 28 6.0
03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922... 28 6.0
07_03_0382 + 17470508-17470807,17471449-17474517 28 7.9
>07_03_1324 -
25825153-25825197,25825705-25825785,25825907-25825967,
25826005-25826060,25826171-25826239,25826366-25826473,
25826555-25826635,25826795-25826951,25827060-25827177,
25827285-25827339,25827779-25827814
Length = 288
Score = 143 bits (347), Expect = 1e-34
Identities = 71/143 (49%), Positives = 102/143 (71%), Gaps = 2/143 (1%)
Frame = +2
Query: 251 KKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 430
K ++V+VLGGPGSGKGTQC IV +GFTHLS GDLLRAE+KSGSE + +++ G++
Sbjct: 23 KVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKI 82
Query: 431 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVS--VIIYFEASSET 604
VP+E+ + LL++A++ E+ FLIDG+PR + AF EN+ +S +++F+ S E
Sbjct: 83 VPSEVTIKLLQDAMI--KNENDKFLIDGFPRNEENRAAF-ENVTKISPAFVLFFDCSEEE 139
Query: 605 LTQRLLGRAASSGRADDNEETIK 673
+ +RLLGR + GR DDN ETI+
Sbjct: 140 MERRLLGR--NQGRVDDNIETIR 160
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 138 bits (334), Expect = 4e-33
Identities = 68/143 (47%), Positives = 98/143 (68%), Gaps = 2/143 (1%)
Frame = +2
Query: 251 KKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 430
K I++VLGGPGSGKGTQC IV +GF HLS G+LLRAE+ SGSE + I+ G++
Sbjct: 22 KVKIIFVLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEINSGSENGTMIDTIITEGKI 81
Query: 431 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE--NIAPVSVIIYFEASSET 604
VP+EI + LL+EAI+ + ++IDG+PR + + FE +I+P +++F+ S E
Sbjct: 82 VPSEITIKLLQEAIIKGGNDK--YIIDGFPRNEENRVVFESVISISP-EFVLFFDCSEEE 138
Query: 605 LTQRLLGRAASSGRADDNEETIK 673
+ +RLLGR + GR+DDN ETI+
Sbjct: 139 MERRLLGR--NQGRSDDNIETIR 159
>04_01_0026 -
354855-354876,355184-355248,355710-355817,356215-356295,
356729-356885,356990-357107,357485-357533,357806-357901
Length = 231
Score = 132 bits (318), Expect = 3e-31
Identities = 64/143 (44%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Frame = +2
Query: 248 SKKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGE 427
+K I +VLGGPGSGKGTQC +I + +GF HLS GDLLR+E+ +G E+ + + I++ G+
Sbjct: 40 TKPFIAFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGGEKGELILNIIKEGK 99
Query: 428 LVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE-NIAPVSVIIYFEASSET 604
+VP+EI ++L+++A+ + ++K LIDG+PR + IAFE ++I+F+ +
Sbjct: 100 IVPSEITVELIRKAM--ESSDAKRVLIDGFPRCEENRIAFERITGTEPDLVIFFDCPEDE 157
Query: 605 LTQRLLGRAASSGRADDNEETIK 673
+ +RLLGR + GR DDN ETIK
Sbjct: 158 MVKRLLGR--NQGRVDDNIETIK 178
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 126 bits (303), Expect = 2e-29
Identities = 60/123 (48%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Frame = +2
Query: 263 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNE 442
V + G P SGKGTQC+ I +KYG H+S GDLLRAE+ +GSE K ME+G+LVP+E
Sbjct: 76 VMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDE 135
Query: 443 IVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE-NIAPVSVIIYFEASSETLTQRL 619
IV++++KE +L + KG+L+DGYPR SQ +A E NI P + I + E L +R+
Sbjct: 136 IVVNMVKERLLQPDAQEKGWLLDGYPRSYSQAMALETLNIRP-DIFILLDVPDELLVERV 194
Query: 620 LGR 628
+GR
Sbjct: 195 VGR 197
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 126 bits (303), Expect = 2e-29
Identities = 68/143 (47%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Frame = +2
Query: 251 KKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 430
K ++V+VLGGPGSGKGTQC IV +GF HLS GDLLRAE+KSGSE + +++ G++
Sbjct: 26 KVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKI 85
Query: 431 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE--NIAPVSVIIYFEASSET 604
VP+E EA++ + FLIDG+PR + AFE I P + +++F+ S E
Sbjct: 86 VPSE-------EAMIKSGNDK--FLIDGFPRNEENRAAFENVTKITP-AFVLFFDCSEEE 135
Query: 605 LTQRLLGRAASSGRADDNEETIK 673
+ +RLLGR + GR DDN ETI+
Sbjct: 136 MERRLLGR--NQGRVDDNIETIR 156
>06_01_0067 +
561910-561987,562698-562759,564293-564338,564701-564758,
564892-565009,565130-565286,565611-565718,565884-565955,
566058-566174,566309-566404
Length = 303
Score = 101 bits (241), Expect = 7e-22
Identities = 49/105 (46%), Positives = 71/105 (67%)
Frame = +2
Query: 236 PIDTSKKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIM 415
P K +IV+V+GGPGSGKGTQC KIV ++GFTHLS GDLLR E K +E+ + +M
Sbjct: 69 PPPGKKITIVFVIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLM 128
Query: 416 ERGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFE 550
G+LV +++++ LL +A+ R + FL+DG+PR + A+E
Sbjct: 129 NEGKLVSSDLIVKLLFKAM--RESGNDKFLVDGFPRNEENRHAYE 171
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 99.5 bits (237), Expect = 2e-21
Identities = 53/131 (40%), Positives = 73/131 (55%)
Frame = +2
Query: 197 LMCKSPKCKAYMAPIDTSKKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVK 376
L C++ + A A + K V + G P SGKGTQC IV KYG H+STGDLLRAEV
Sbjct: 72 LRCRASEGAAAAARKEAPLK--VMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVS 129
Query: 377 SGSERAKCLTAIMERGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEEN 556
SG+E K M+ G LVP+++V D++ + +G+L+DGYPR +Q + E
Sbjct: 130 SGTEIGKKAKEYMDNGMLVPDQVVTDMVVSRLSQPDVRERGWLLDGYPRSYAQAQSLESM 189
Query: 557 IAPVSVIIYFE 589
+ I E
Sbjct: 190 KIRPDIFIVLE 200
>03_01_0215 +
1696250-1696573,1697653-1697793,1698267-1698539,
1698755-1698814,1698890-1699033
Length = 313
Score = 81.8 bits (193), Expect = 5e-16
Identities = 40/128 (31%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Frame = +2
Query: 251 KKSIVWV-LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGE 427
++++ WV LG PG GKGT ++ G H++TGDL+R E+ S + L I+ +G+
Sbjct: 58 ERNVQWVFLGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPLSVQLAEIVNQGK 117
Query: 428 LVPNEIVLDLLKEAILARAEESK-GFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSET 604
LV +EI+++LL + + E+ + GF++DG+PR Q + + + +++ + +
Sbjct: 118 LVSDEIIINLLSKRLKKGEEQGESGFILDGFPRTVKQA-EILDGVTDIDMVVNLKLREDV 176
Query: 605 LTQRLLGR 628
L ++ LGR
Sbjct: 177 LVEKCLGR 184
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 79.0 bits (186), Expect = 3e-15
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Frame = +2
Query: 269 VLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIV 448
++G PGSGKGTQ I +Y HL+TGD+LRA V + + M++GELV +++V
Sbjct: 35 LVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLV 94
Query: 449 LDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENI----APVSVIIYFEASSETLTQR 616
+ ++ EA + + KGF++DG+PR Q +E + V ++ F L +R
Sbjct: 95 VGIIDEA-MKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSILEER 153
Query: 617 LLGR--AASSGRA 649
+ GR SSGR+
Sbjct: 154 ITGRWIHPSSGRS 166
>12_01_0813 +
7475591-7475693,7476972-7477117,7477205-7477324,
7477445-7477612,7478252-7478341,7478941-7479039
Length = 241
Score = 77.0 bits (181), Expect = 1e-14
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Frame = +2
Query: 263 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNE 442
V ++G PG GKGTQ I ++ HL+TGD+LRA V + + M++GELV ++
Sbjct: 31 VILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDD 90
Query: 443 IVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIA----PVSVIIYFEASSETLT 610
+V+ ++ EA + + KGF++DG+PR Q +E +A + ++ F L
Sbjct: 91 LVVGIIDEA-MKKTSCQKGFILDGFPRTVVQAQKLDEMLAKQGTKIDKVLNFAIDDAILE 149
Query: 611 QRLLGR--AASSGRA 649
+R+ GR SSGR+
Sbjct: 150 ERITGRWIHPSSGRS 164
>04_04_1543 -
34270578-34270718,34271069-34271341,34271782-34271922,
34272365-34272667
Length = 285
Score = 77.0 bits (181), Expect = 1e-14
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Frame = +2
Query: 254 KSIVWV-LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 430
+ + WV LG PG GKGT ++ H++TGDL+R + S ++ L I+ G+L
Sbjct: 52 RRVQWVFLGCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPGPFSEQLAEIVNNGKL 111
Query: 431 VPNEIVLDLLKEAILARAEESK-GFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETL 607
V +EI+++LL + + AE+ + GF++DG+PR Q E + + ++I + E L
Sbjct: 112 VSDEIIINLLSKRLEEGAEKGELGFILDGFPRTIRQA-EILEGVTDIDLVINLKLREEAL 170
Query: 608 TQRLLGRAASS 640
+ LGR S
Sbjct: 171 LAKCLGRRMCS 181
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Frame = +2
Query: 224 AYMAPIDTSKKSIVWV-LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKC 400
A M P WV +G PG K ++ ++S G L+R E+ S K
Sbjct: 59 AEMCPTGGGGGGPQWVVMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELSPASSLYKK 118
Query: 401 LTAIMERGELVPNEIVLDLLKEAILARAEESK-GFLIDGYPREKSQGIAFEENIAPVSVI 577
+ + G+LVP +I+ LL + + + + GF++DG PR Q +E I + ++
Sbjct: 119 IANSVNEGKLVPEDIIFGLLTKRLEEGYNKGETGFILDGIPRTHMQAEILDE-IVDIDLV 177
Query: 578 IYFEASSETLTQRLLG 625
+ F+ + +R G
Sbjct: 178 LNFKCADNCFMKRRFG 193
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 263 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLR 364
V V G PG+GK T C + H++ GDL+R
Sbjct: 15 VLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVR 48
>01_05_0027 -
17331888-17331968,17332236-17332806,17333190-17333335,
17333412-17333459
Length = 281
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 196 SDVQITEMQSVHGT--HRYIEKVNRVGPGRSRIRKGNTMRQDRRQIRVHSPLDWRPAQG* 369
S V + +HG HR + +++ PGRSR+ + MR+ ++ RV S RP+
Sbjct: 161 SPVSFSSASLLHGLLLHRVLSRLHTTDPGRSRLAR---MRKSWKKFRVGSARCCRPSMSR 217
Query: 370 SQKRLGEG 393
K G G
Sbjct: 218 PSKLPGSG 225
>05_06_0027 -
25029725-25030017,25030097-25030211,25030347-25030504,
25030582-25030682,25030846-25030994,25031089-25031239,
25031329-25031482,25032249-25032321,25032446-25032676
Length = 474
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Frame = +2
Query: 239 IDTSKKSIVWVLGGPGSGKGTQCDKIVAKY---GF-THLSTGDLLRAEVKSGSERAKCLT 406
+D K S G P SGK T C K + GF L D RA ++
Sbjct: 87 LDPGKPSFTPTKGKPSSGKTTTCTKYAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKA 146
Query: 407 AIMERGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE 553
I G + ++ V ++ R E+S ++D R K + FEE
Sbjct: 147 KIPYYGSYMESDPVKIAVEGVERFRKEKSDLIIVDTSGRHKQEAALFEE 195
>02_01_0555 + 4086434-4087157,4087257-4087943,4088495-4089162
Length = 692
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 104 K*TNTFLYYAMEKKLCEPCKEPIVDKLPPCPLMC--KSPKCKAYMAPIDTSKKSIVWVLG 277
K +N L ME L + P+V +M K+P+C A A SKKS VW LG
Sbjct: 511 KSSNVLLDGDMEAVLSDYALVPVVTASAAAQVMVAYKAPECVAAAAAGKPSKKSDVWSLG 570
>11_08_0091 -
28303446-28303732,28303825-28304297,28304383-28304574,
28304688-28304986,28305086-28305121
Length = 428
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 260 IVWVLGGPGSGKGTQCDKIVAKYGFT--HLSTGDL 358
I+ + GG G GK QC+ + AK G +S G+L
Sbjct: 151 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 185
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/121 (22%), Positives = 55/121 (45%)
Frame = +2
Query: 260 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPN 439
++ ++G GSGK TQ + + + G+T + G + + + + + E G + +
Sbjct: 435 VIVIVGETGSGKTTQIPQYLHEAGYT--AKGKVACTQPRRVAAMSVAARVSQEMGVKLGH 492
Query: 440 EIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRL 619
E+ + E + K ++ DG + G E ++A SV++ EA TL+ +
Sbjct: 493 EVGYSIRFEDCTSEKTLIK-YMTDGMLLREFLG---EPDLASYSVVMVDEAHERTLSTDI 548
Query: 620 L 622
L
Sbjct: 549 L 549
>05_01_0147 - 981697-983739
Length = 680
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +2
Query: 182 LPPCPLMCKSPKCKAYMAPIDTSKKS--IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGD 355
LPP P +P KA + I + ++ V+G GSGK T D + + L
Sbjct: 44 LPPLPT--DAPPAKALLDGISGEARDGEVLAVMGASGSGKSTLLDALAGRIARGSLRGRV 101
Query: 356 LLRAEVKSGSERAKCLTA-IMERGELVPNEIVLDLL 460
L E G R + ++A +M+ L P V + L
Sbjct: 102 ELNGEALHG-RRVRAISAYVMQDDVLYPMLTVRETL 136
>11_03_0215 +
11809068-11809300,11809872-11809964,11810976-11811193,
11812780-11812832,11813411-11813527,11814817-11814908,
11815672-11815758,11816625-11816742
Length = 336
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 260 IVWVLGGPGSGKGTQCDKIVAKYGFT 337
+V V+G GSGK TQ +I+ + G+T
Sbjct: 33 VVVVIGETGSGKSTQLSQILHRRGYT 58
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = +2
Query: 158 CKEPIVDKLPPCPLMCKSPK--CKAYMAPIDTSKKS-IVWVLGGPGSGKGTQCDKIVAKY 328
C +L C MC + K K T + S + +LG PGSGK T + K
Sbjct: 76 CAINAAQELAACAHMCTTRKKPMKIINEATGTIRPSRMTLLLGAPGSGKTTLLKALAGKL 135
Query: 329 GFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIVLDLLKEAI 472
+ G + + S + L A + + +L E+ L LK+ I
Sbjct: 136 DSSLKMKGKVTYNGEEVNSSTPQYLHAYVSQYDLHHAEMTLSSLKKLI 183
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/87 (27%), Positives = 44/87 (50%)
Frame = +3
Query: 303 NATRSSPNTGSLTSRLETCSGLKSKAARRGRNALPLLWKEASLSLMKSSWIC*KKRSWPA 482
NAT +SP + S+TS + G ++ + +G +++P+ K ++ S ++ P
Sbjct: 168 NATLNSPRSPSVTSSVTKKVGSRTSSMDKG-SSMPIRKKSSTADSRDSRFM-----MLPQ 221
Query: 483 LKNPKASSSTATLARSHRVSLLKRTSL 563
+ + KAS +R HRV LK+ L
Sbjct: 222 V-DLKASDEVRLDSRGHRVRTLKQLRL 247
>06_03_0933 +
26067109-26067232,26067334-26067486,26068929-26069279,
26069375-26069451,26069665-26070982,26071948-26072009,
26072253-26072309
Length = 713
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -3
Query: 415 HNSGKAFRPLRAAFDFSPEQVSSREVS---EPVFGDDL 311
HN G +FRP +A + Q+SS S EP+FGD+L
Sbjct: 532 HNDGTSFRPSQANI-ANINQLSSFAASSGQEPMFGDEL 568
>06_01_0785 -
5873244-5873357,5873458-5873562,5874333-5874424,
5874525-5874594,5875080-5875202,5875287-5875372,
5875547-5875648,5875874-5876096,5876217-5876282,
5876407-5876497,5876574-5876701,5877734-5877749,
5878171-5878318,5878440-5878511,5878586-5878690,
5879122-5879291,5880093-5880424
Length = 680
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 473 LARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLLGRAAS 637
+A A + + I+G P EK + + +E+ PV +I E ++ TL Q G A S
Sbjct: 92 IALAGDGRLLWIEGRPEEKGRMVIVKEDDKPVDIIPQ-EFAARTLAQEYGGGAFS 145
>04_04_0964 -
29749624-29749649,29749742-29749945,29750036-29750634,
29750742-29750826,29750914-29751562,29751568-29751643,
29753891-29753957,29754097-29754998,29756579-29756790
Length = 939
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -1
Query: 657 LSSARPELAA-RPSRRC--VSVSEEASKYIITETGAMFSSKAIPCD 529
+ S PE+ A R SR C V+V + K ++ T A S A+PCD
Sbjct: 9 MPSRTPEVVAGRASRGCHHVNVLPMSGKIMLPLTAASSGSVALPCD 54
>03_05_0398 +
23790257-23790323,23791116-23791339,23792208-23792275,
23794738-23794980,23795108-23795237,23797235-23797954
Length = 483
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 206 KSPKCKAYMAPIDTSKKSIVWVL--GGPGSGKGTQCDKIV 319
+ P C MAP+ ++S V +L GG G+GK T +I+
Sbjct: 160 EEPHCTDVMAPVAHDERSPVLLLMGGGMGAGKSTVLKEIL 199
>07_03_0382 + 17470508-17470807,17471449-17474517
Length = 1122
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/87 (28%), Positives = 41/87 (47%)
Frame = +2
Query: 248 SKKSIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGE 427
S K++V ++GG G+GK T KI + T + G ++ V + + L+AI+
Sbjct: 186 SAKTLVAIVGGSGTGKTTLAWKIHDDHR-TRNAFGMIVWVSVFNDFDDIGLLSAIVTAAG 244
Query: 428 LVPNEIVLDLLKEAILARAEESKGFLI 508
P E E +LA + K FL+
Sbjct: 245 GNPKEAKNRTQLELMLASMLKGKRFLL 271
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,693,512
Number of Sequences: 37544
Number of extensions: 399815
Number of successful extensions: 1280
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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