Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28a06
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.45 
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    25   1.8  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   1.8  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    25   2.4  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    25   3.2  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    25   3.2  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    25   3.2  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    25   3.2  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    25   3.2  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   9.8  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    23   9.8  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.5 bits (58), Expect = 0.45
 Identities = 19/67 (28%), Positives = 25/67 (37%)
 Frame = +3

Query: 360 PGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAYTMGARVGFQ 539
           PG   PE  P  K  +  + S+G      PR     P    L+   G P Y +  + G  
Sbjct: 452 PGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYGIPGQKGNA 511

Query: 540 AKAKSPG 560
             A  PG
Sbjct: 512 GMAGFPG 518


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 372 APERCPPMKDPRAP 413
           A +RCPP  DP+ P
Sbjct: 17  ADDRCPPQDDPKQP 30


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +3

Query: 330 PSRAATRAPGPGSHAPERCPPMKDPRAPAY 419
           PSR     P P    P R PP    RAPA+
Sbjct: 388 PSRPTI--PAPQQQTPPRQPPATGDRAPAH 415


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 354 PGPGSHAPERCPPMKDPRAPAY 419
           P P    P R PP    RAPA+
Sbjct: 393 PAPQQQTPPRQPPATGDRAPAH 414


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 372 APERCPPMKDPRAP 413
           A +RCPP  DP  P
Sbjct: 17  ADDRCPPQDDPEQP 30


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 372 APERCPPMKDPRAP 413
           A +RCPP  DP  P
Sbjct: 17  ADDRCPPQDDPEQP 30


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 372 APERCPPMKDPRAP 413
           A +RCPP  DP  P
Sbjct: 17  ADDRCPPQDDPEQP 30


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 372 APERCPPMKDPRAP 413
           A +RCPP  DP  P
Sbjct: 17  ADDRCPPQDDPEQP 30


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 372 APERCPPMKDPRAP 413
           A +RCPP  DP  P
Sbjct: 17  ADDRCPPQDDPEQP 30


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 318 GARFPSRAATRAPGPGSHAPERCPPM 395
           G   PS    R P P ++AP + P +
Sbjct: 55  GTPAPSTVRPRPPAPPTNAPSQLPAL 80


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 372 APERCPPMKDPRAP 413
           A  RCPP  DP  P
Sbjct: 17  ADVRCPPQDDPEQP 30


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 372 APERCPPMKDPRAP 413
           A  RCPP  DP  P
Sbjct: 17  ADVRCPPQDDPEQP 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,155
Number of Sequences: 2352
Number of extensions: 11010
Number of successful extensions: 71
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)