Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte27p23
(617 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 26 0.34
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 26 0.34
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 25 0.45
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 25 0.59
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 24 1.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.5
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.6
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 9.6
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 9.6
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.34
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 81 NNTKLNYSNKYNRDYMKI 28
NN NY+N YN +Y K+
Sbjct: 99 NNYNNNYNNNYNNNYKKL 116
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 81 NNTKLNYSNKYNRDY 37
NN NY+N YN +Y
Sbjct: 95 NNYNNNYNNNYNNNY 109
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.34
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 81 NNTKLNYSNKYNRDYMKI 28
NN NY+N YN +Y K+
Sbjct: 99 NNYNNNYNNNYNNNYKKL 116
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 81 NNTKLNYSNKYNRDY 37
NN NY+N YN +Y
Sbjct: 95 NNYNNNYNNNYNNNY 109
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.45
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 81 NNTKLNYSNKYNRDYMKI 28
NN NY+N YN +Y K+
Sbjct: 95 NNNYNNYNNNYNTNYKKL 112
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.0 bits (52), Expect = 0.59
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 81 NNTKLNYSNKYN 46
NN K NY+NKYN
Sbjct: 94 NNYKYNYNNKYN 105
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.2 bits (50), Expect = 1.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 409 SRCRRTARLEARSYRKK-RGSNEYYKEIESTFSIRSGFRRFIAS 537
SR RR +R R YRKK R + + E E R+ +R+ S
Sbjct: 232 SRERRCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRS 275
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 78 NTKLNYSNKYNRDYMKI 28
N NY+N YN +Y K+
Sbjct: 335 NNYNNYNNNYNNNYKKL 351
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 81 NNTKLNYSNKYNRDYMKI 28
NN NY+N Y + Y I
Sbjct: 338 NNYNNNYNNNYKKLYYNI 355
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 2.4
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 386 KRCKPCKDHDVEGLQDWKPEVIGKNAVRTNITKKLRARSPLDQDLEDSLPRQIREIH 556
KRCK LQ+ + GK+ + T+ +R+PL Q+ + + +I H
Sbjct: 471 KRCKDLASFMGNLLQETRTPGFGKDVLATDERSFSGSRNPLLQEHDSVMLGEISPHH 527
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 66 NYSNKYNRDYMKI 28
NY+N YN +Y K+
Sbjct: 96 NYNNNYNTNYKKL 108
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 66 NYSNKYNRDYMKI 28
NY+N YN +Y K+
Sbjct: 96 NYNNNYNTNYKKL 108
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 66 NYSNKYNRDYMKI 28
NY+N YN +Y K+
Sbjct: 96 NYNNNYNTNYKKL 108
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 66 NYSNKYNRDYMKI 28
NY+N YN +Y K+
Sbjct: 96 NYNNNYNTNYKKL 108
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 66 NYSNKYNRDYMKI 28
NY+N YN +Y K+
Sbjct: 96 NYNNNYNTNYKKL 108
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 66 NYSNKYNRDYMKI 28
NY+N YN +Y K+
Sbjct: 96 NYNNNYNTNYKKL 108
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 66 NYSNKYNRDYMKI 28
NY+N YN +Y K+
Sbjct: 96 NYNNNYNTNYKKL 108
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 419 EGLQDWKPEVIGKNAVRTNI 478
+GL +WKP I K++ ++
Sbjct: 138 QGLVEWKPPAIYKSSCEIDV 157
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 66 NYSNKYNRDY 37
NYS+KY R+Y
Sbjct: 205 NYSSKYMREY 214
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.0 bits (42), Expect = 9.6
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 423 DCKIGSQKLSEKTRFERILQRN*EHVLH*IRI*KIHCLDKSGKYIMRLEKVLG 581
D G+QK K + N VLH +++ H + S IM L + G
Sbjct: 239 DVVSGTQKKKRKIYLFSGHESNIASVLHALQLYYPHVPEYSSSIIMELHNIEG 291
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.0 bits (42), Expect = 9.6
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 423 DCKIGSQKLSEKTRFERILQRN*EHVLH*IRI*KIHCLDKSGKYIMRLEKVLG 581
D G+QK K + N VLH +++ H + S IM L + G
Sbjct: 254 DVVSGTQKKKRKIYLFSGHESNIASVLHALQLYYPHVPEYSSSIIMELHNIEG 306
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,724
Number of Sequences: 438
Number of extensions: 4255
Number of successful extensions: 33
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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