Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27p08
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   3.6  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   3.6  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   8.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   8.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   8.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.3  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 448 LIYSLLLSQRLC 413
           L+YS+ +SQRLC
Sbjct: 10  LLYSVAMSQRLC 21


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 448 LIYSLLLSQRLC 413
           L+YS+ +SQRLC
Sbjct: 9   LLYSVAMSQRLC 20


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 301 DYDFDND 321
           DYDFDND
Sbjct: 46  DYDFDND 52


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 330 HVNIIVKIIIFHRFF 286
           H N ++K I F RFF
Sbjct: 2   HFNNVIKYINFDRFF 16


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 578 SPPSTSTIDTLRSRI 622
           SP S STI TLR ++
Sbjct: 402 SPQSQSTIQTLRPQV 416


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 260 KRKTRHGKMKNLWKIMI 310
           KRK+R G    LW+ ++
Sbjct: 449 KRKSREGSTTYLWEFLL 465


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,402
Number of Sequences: 438
Number of extensions: 4169
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)