Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27o08
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   3.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   3.3  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   4.4  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   5.8  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   5.8  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   5.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   5.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   5.8  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -2

Query: 474 PARATPRGCSGCNRRRPCSRSSVVHRLRQGFH 379
           P    P+G S   R R    SS +  L + FH
Sbjct: 74  PEMERPKGASNGKRARTAYTSSQLVELEREFH 105


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -2

Query: 474 PARATPRGCSGCNRRRPCSRSSVVHRLRQGFH 379
           P    P+G S   R R    SS +  L + FH
Sbjct: 94  PEMERPKGASNGKRARTAYTSSQLVELEREFH 125


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 465 ATPRGCSGCNRRRPCSRSSVVHRLRQ 388
           A   GC+ CN+++  +   V+  L Q
Sbjct: 69  ALSSGCTKCNQKQKETAEKVIRHLTQ 94


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -2

Query: 465 ATPRGCSGCNRRRPCSRSSVVHRL 394
           A   GC+ CN +       V+H L
Sbjct: 67  ALQNGCAKCNEKHKEGVRKVIHHL 90


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 184 FVIVPFVARHGIATSRP 134
           FV+V F A  G+A +RP
Sbjct: 4   FVLVAFAAVLGLALARP 20


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -2

Query: 465 ATPRGCSGCNRRRPCSRSSVVHRL 394
           A   GC+ CN +       V+H L
Sbjct: 67  ALQNGCAKCNEKHKEGVRKVIHHL 90


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 361 EIQTRAEHPGISFRISSLPNV 299
           EI+    H G+   +S LPNV
Sbjct: 195 EIRNAFRHDGLLLTMSVLPNV 215


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 574 RFSVNLLEADSMSP 533
           R S+NLLE D+  P
Sbjct: 236 RHSINLLEEDNQKP 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,250
Number of Sequences: 336
Number of extensions: 2658
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)