Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte27o08
(589 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0036 + 436592-437572 52 3e-07
01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010 48 7e-06
04_01_0037 + 444239-444667,444817-444825 47 1e-05
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026... 46 2e-05
04_01_0038 + 446314-446787,446829-447350 46 2e-05
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 42 5e-04
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 40 0.001
04_01_0033 + 391565-391974,393484-393520,394959-395483 38 0.006
04_01_0035 - 433848-434372,434905-435381 38 0.008
05_02_0104 - 6638018-6638599,6639284-6639632,6641843-6642048 33 0.17
02_02_0141 - 7131260-7131581,7132124-7132430,7134018-7134076,713... 30 1.6
02_02_0429 - 10135695-10135769,10135872-10135972,10138416-101385... 29 2.7
04_04_0529 - 25997736-25998055,25998441-25998804,25999563-259996... 29 3.6
06_03_0849 - 25344261-25344416,25344652-25344808,25344917-253450... 28 6.3
01_07_0061 + 40818077-40818241,40818494-40818716,40819015-408192... 28 6.3
10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735... 27 8.4
08_01_0847 + 8301435-8301668,8304531-8304641,8304883-8304939,830... 27 8.4
01_06_0645 + 30826267-30826307,30826403-30826454,30826580-308266... 27 8.4
01_01_0655 - 5001495-5002392,5002493-5002653,5002779-5003184,500... 27 8.4
>04_01_0036 + 436592-437572
Length = 326
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +3
Query: 366 LPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLIL 545
+P+ E+LDA + L+ + TVSAG NH + E RG+Q+ N + S VA+ AVGL+L
Sbjct: 61 IPVGAELLDAVPS-LRCIITVSAGTNHIDLRECARRGVQVANAGGIYSTDVADYAVGLLL 119
Query: 546 SASR 557
R
Sbjct: 120 DVLR 123
>01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010
Length = 454
Score = 47.6 bits (108), Expect = 7e-06
Identities = 22/54 (40%), Positives = 38/54 (70%)
Frame = +3
Query: 408 LKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLILSASRRFTE 569
L+IVS+ S G + + + RG+++TNTP+VL+ VA++AVGL ++A R+ +
Sbjct: 70 LEIVSSFSVGIDRVDLDACLRRGVRVTNTPDVLTDDVADLAVGLAIAALRKIPQ 123
>04_01_0037 + 444239-444667,444817-444825
Length = 145
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 40/64 (62%)
Frame = +3
Query: 369 PITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLILS 548
P++ +++ A +L+IV S G +H + + R RGI +TN V +P VA+ AVGL+++
Sbjct: 57 PVSADLV-ARLPKLEIVVATSTGVDHIDLDACRRRGISVTNAGEVFAPDVADYAVGLVVA 115
Query: 549 ASRR 560
RR
Sbjct: 116 VLRR 119
>04_04_1392 +
33201015-33201600,33202030-33202406,33202528-33202638,
33202720-33202815,33202899-33203570
Length = 613
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = +3
Query: 303 LGREEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQ 482
L EE+ IP C AL+ S + ++ +A+G +L++V G ++ + G
Sbjct: 100 LSPEELRAKIPLCDALIVRSGTKVGRDVFEASGGRLRVVGRAGVGIDNVDLAAATEHGCL 159
Query: 483 LTNTPNVLSPAVAEVAVGLILSASRRFTE 569
+ N P + A AE + L+ + SR +
Sbjct: 160 VVNAPTANTVAAAEHGIALLTAMSRNIAQ 188
>04_01_0038 + 446314-446787,446829-447350
Length = 331
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 345 ALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAE 524
AL+ + +T +DA A L++V SAG +H N R RGI +TN N S A+
Sbjct: 52 ALLTVDLPAVTAAQIDALPA-LELVVASSAGVDHINLGACRRRGIAVTNAQNAFSADAAD 110
Query: 525 VAVGLILSASRR 560
AVGL+++ RR
Sbjct: 111 YAVGLLVAVLRR 122
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/85 (24%), Positives = 41/85 (48%)
Frame = +3
Query: 315 EILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNT 494
E+L + AL+ S +T E+L+A +L++V G ++ + + G + N
Sbjct: 110 ELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVGIDNVDLQAATEAGCLVVNA 169
Query: 495 PNVLSPAVAEVAVGLILSASRRFTE 569
P + A AE + L+ S +R ++
Sbjct: 170 PTANTVAAAEHGIALLASMARNVSQ 194
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = +3
Query: 303 LGREEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQ 482
L EE+ + ALV S +T E+ +AA +L++V G ++ + + G
Sbjct: 100 LTAEELRAKVSLVDALVVRSATRVTREVFEAARGRLRVVGRAGVGIDNVDLQAATEAGCL 159
Query: 483 LTNTPNVLSPAVAEVAVGLILSASRRFTE 569
+ N P + A AE A+ L+ + +R +
Sbjct: 160 VVNAPTANTVAAAEHAIALLAAMARNVAQ 188
>04_01_0033 + 391565-391974,393484-393520,394959-395483
Length = 323
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +3
Query: 384 ILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLILSASRR 560
+ DA + +VST +AG +H + E RG+ + N+ V S VA+ AVG+++ RR
Sbjct: 74 LFDAVPSLRCVVST-AAGVDHIDLAECARRGVVVANSGTVYSGDVADHAVGMVIDVMRR 131
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +3
Query: 366 LPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAVAEVAVGLIL 545
+ + LDA + L V T AG +H + E RG+ + V S VA+ AVGL++
Sbjct: 72 IQVNAAFLDAVPS-LGCVVTTGAGVDHIDLAECARRGVAVAGAGTVFSTDVADHAVGLLV 130
Query: 546 SASRRFTENLDQVR 587
RR + + VR
Sbjct: 131 DVLRRISASDRYVR 144
>05_02_0104 - 6638018-6638599,6639284-6639632,6641843-6642048
Length = 378
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 549 PTV*APRQPLQRPGTGRSGCSSAVYPARATPRGCSGCNRRRPCSRSSVVHRLRQ 388
PT P QP +P G+ G A YP + G NRRR S + R R+
Sbjct: 227 PTSPPPEQPPAKPDGGKDGGGGAFYPLQHPAVGAPTGNRRRGGDASRRLRRRRR 280
>02_02_0141 -
7131260-7131581,7132124-7132430,7134018-7134076,
7134586-7134667,7135972-7136047,7136382-7136443,
7136946-7137006
Length = 322
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 569 LSESSRGRQYEPHGNLCNGRGQDVRGVRQLYTP 471
+ + R +Q++ +LCN R DVRG +Q + P
Sbjct: 89 IGKIDRLKQHKTGSDLCNARTDDVRGDKQPFAP 121
>02_02_0429 -
10135695-10135769,10135872-10135972,10138416-10138532,
10138810-10139041,10142326-10142442,10142762-10142827
Length = 235
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 568 SVNLLEADSMSPTATSATAGDRTFGVFVSCIPRARNSSG 452
S LL +++ PT T+A A R G+F+ + R + SG
Sbjct: 32 SAALLAGEAILPTVTAAVAVARQRGIFIVWVVREHDPSG 70
>04_04_0529 -
25997736-25998055,25998441-25998804,25999563-25999675,
25999880-25999989,26000155-26000311,26000390-26000915,
26001101-26001265,26002470-26002589,26003022-26003093,
26003422-26003499,26003965-26004057,26004491-26004647,
26005351-26005589,26006907-26007050,26007637-26007666,
26010610-26010993,26011486-26011554,26012353-26012418,
26013166-26013255,26013583-26013628,26014318-26014419,
26014552-26014694
Length = 1195
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 327 LIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVL 506
LI GC+ +W+ + E + +L + SA + P E R +L N VL
Sbjct: 203 LILGCNGFIWVGEHVVVGENANMMENKLNL----SAEVENFTPLETRKHICRLANAVRVL 258
Query: 507 SPAVAEVAVGLIL-SASRRFTENLD 578
S + V LI+ +A + N++
Sbjct: 259 SALGFTLTVELIIETAEASVSSNIE 283
>06_03_0849 -
25344261-25344416,25344652-25344808,25344917-25345056,
25345160-25345295,25345392-25345663,25345809-25346068,
25346716-25347035,25347287-25347352,25347439-25347510,
25347609-25347680,25347776-25347858,25348068-25348139,
25348389-25348485,25348918-25349050,25349158-25349236
Length = 704
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 162 ATNGTMTKNLKVLVSSNDYPPTALKLLEDHF 254
+TN +M+K +KV V++N Y +L++ + F
Sbjct: 365 STNSSMSKKMKVSVTANPYTVASLQVATNSF 395
>01_07_0061 +
40818077-40818241,40818494-40818716,40819015-40819263,
40819455-40819505,40819611-40819871,40819994-40820046,
40820234-40820348,40820475-40820696,40821280-40822253
Length = 770
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +3
Query: 42 KTANTYLSMLIYKKVLCRFPAMITRFTQLYIGLLVAIPCLATNGTMTKNLKVLVSSNDYP 221
K +N Y++ L K+ L R P + +++L G+ +P L ++ V++S P
Sbjct: 534 KVSNNYVAELAVKQNLARLPGIGFLYSELVQGIPPILPHLVEKVPSIHSVLVIISIKYLP 593
Query: 222 PTALKLLE 245
+ ++ E
Sbjct: 594 ISKIETKE 601
>10_08_0789 +
20569738-20570207,20573425-20573464,20573484-20573536,
20573633-20574212,20574323-20575384,20575631-20575813,
20576112-20576199,20576285-20576532,20576712-20577053,
20579026-20579163,20579521-20579547
Length = 1076
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -2
Query: 531 RQPLQRPGTGRSGCSSAVYPARATPRGCSGCNRRRPCSRSSV 406
R+ RP RS SS AR P G RRRP + SV
Sbjct: 64 RRGTTRPPRTRSRRSSCSRAARTPPSGARSPRRRRPGAGESV 105
>08_01_0847 +
8301435-8301668,8304531-8304641,8304883-8304939,
8305040-8305195
Length = 185
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 492 CSSAVYPARATPRGCSGCNRRRPCSR 415
C+ PA A R C+G +RRRP R
Sbjct: 47 CTLRGMPASAARRFCTGLDRRRPSPR 72
>01_06_0645 +
30826267-30826307,30826403-30826454,30826580-30826659,
30826804-30826882,30826962-30827045,30827131-30827276,
30827362-30827628,30827825-30827907,30828162-30828271,
30828544-30829159,30829471-30829620,30829700-30829800
Length = 602
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 456 EELRARGIQLTNTPNVLSPAVAEV 527
++ RG + TPNV +PAV EV
Sbjct: 267 DDFNPRGFSTSTTPNVSTPAVPEV 290
>01_01_0655 -
5001495-5002392,5002493-5002653,5002779-5003184,
5003523-5003572,5004710-5004727
Length = 510
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 348 LVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLTNTPNVLSPAV 518
L W + + I D+A V+ + A Y+ +RAR + +TN N L V
Sbjct: 217 LRWRTGVNIVPVRCDSANGFQVTVAALQAAYDEAAAVGMRARAVLITNPSNPLGTTV 273
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,423,229
Number of Sequences: 37544
Number of extensions: 319450
Number of successful extensions: 1035
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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