Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27o08
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    26   1.0  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   2.4  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   4.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   5.5  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   9.7  

>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 14/65 (21%), Positives = 27/65 (41%)
 Frame = +2

Query: 134 RSAGSDTVSSYERHNDEKPKSISFIQRLPADRAEIT*RSLYSSTVKVFKLWSRRKHVRQR 313
           + +   T  SY RH   + +      R    R  I   S+   T +  K+W + + ++ +
Sbjct: 3   KESSKRTRQSYSRHQTIELEKEFHFNRYLNRRRRIEIASMLKLTERQIKIWFQNRRMKAK 62

Query: 314 RDPKA 328
           +D  A
Sbjct: 63  KDNSA 67


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +3

Query: 54  TYLSMLIYKKVLCRFPAMITRFTQLYIGLLVAIPCLATNGTMTKNLKV 197
           T L  ++   +LC  PAM+    + +  L++      +N  +T N  V
Sbjct: 311 TMLICVVIVFLLCNLPAMMINIVEAFYSLIIEYMVKVSNLLVTINSSV 358


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -1

Query: 487 VSCIPRARNSSGLQWL*PAETVLTIFSCAPAASRISFVIGRLEIQT 350
           V  + R     GL+ L PA+T   + S      +++F +G +E+Q+
Sbjct: 742 VDQVQRWMQQHGLE-LAPAKTEAVLISSKKTPPQVTFRVGDVEVQS 786


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 551  GRQYEPHGNLCNGRGQDVRGVRQLYTPRAQLLGVAVVVT 435
            G   EP+G LCN   Q V  +       A  L +  V+T
Sbjct: 1044 GGSDEPNGMLCNSLSQRVSTITSTMAAAATPLMMPSVIT 1082


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 228 ALKLLEDHFTVLQSRYLNFGQEGSTLGREEILKLIPG 338
           ALK++ DH  VL       G    +   + + K +PG
Sbjct: 533 ALKIIRDHLQVLWVNNTIIGFIHKSTAEKYLAKCVPG 569


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,605
Number of Sequences: 2352
Number of extensions: 11342
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)