Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27m02
         (431 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131400-1|BAD18547.1|  852|Homo sapiens protein ( Homo sapiens ...    31   1.3  
AJ313524-1|CAC86408.1|  852|Homo sapiens putative binding protei...    31   1.3  
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.       29   5.1  
AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.             29   5.1  

>AK131400-1|BAD18547.1|  852|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16493 fis, clone CTONG3004550, weakly  similar
           to Homo sapiens SH3-domain binding protein 4 (SH3BP4).
           ).
          Length = 852

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +2

Query: 281 WNNIDVEKKNLDELTR----RIKNELEFIKEDSIIESREILKGN 400
           WN +      LD++T+    R +N +  +KED  +  REI  GN
Sbjct: 68  WNQLSASNPFLDDITQLRNNRKRNNISILKEDPFLFCREIENGN 111


>AJ313524-1|CAC86408.1|  852|Homo sapiens putative binding protein
           7a5 protein.
          Length = 852

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +2

Query: 281 WNNIDVEKKNLDELTR----RIKNELEFIKEDSIIESREILKGN 400
           WN +      LD++T+    R +N +  +KED  +  REI  GN
Sbjct: 68  WNQLSASNPFLDDITQLRNNRKRNNISILKEDPFLFCREIENGN 111


>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
          Length = 2479

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +2

Query: 248  LPEKFNTFKSIWNNIDVEKKNLDELTRRIKNELEFIKEDSIIESREILKGNEK 406
            L EK    ++     D+EK++L E  +++K ELE   + S  E  E LK N K
Sbjct: 2381 LKEKIKDLETQLKMSDLEKQHLKEEIKKLKKELENF-DPSFFEEIEDLKYNYK 2432


>AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.
          Length = 1540

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +2

Query: 248  LPEKFNTFKSIWNNIDVEKKNLDELTRRIKNELEFIKEDSIIESREILKGNEK 406
            L EK    ++     D+EK++L E  +++K ELE   + S  E  E LK N K
Sbjct: 1442 LKEKIKDLETQLKMSDLEKQHLKEEIKKLKKELENF-DPSFFEEIEDLKYNYK 1493


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,603,542
Number of Sequences: 237096
Number of extensions: 1078210
Number of successful extensions: 2758
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2758
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)