Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27k17
         (440 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   4.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   7.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -3

Query: 153  VGYRETFAINPN-NFVS 106
            VGYRET + NP+ NF S
Sbjct: 1044 VGYRETSSSNPSYNFSS 1060


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -3

Query: 153  VGYRETFAINPN-NFVS 106
            VGYRET + NP+ NF S
Sbjct: 1040 VGYRETSSSNPSYNFSS 1056


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 120 LDLWRKSLDNPPTFA 164
           LD W+K   + PTFA
Sbjct: 872 LDCWQKERTHRPTFA 886


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 289 PLEKFNCVIFFII 327
           PL + +C++FF+I
Sbjct: 204 PLYQLSCILFFLI 216


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 144 RETFAINPNNFVSSL 100
           +ET+  NP  F+SSL
Sbjct: 174 KETYPFNPVLFISSL 188


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 144 RETFAINPNNFVSSL 100
           +ET+  NP  F+SSL
Sbjct: 212 KETYPFNPVLFISSL 226


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 289 PLEKFNCVIFFIINQLI 339
           PL + + +IFF+I  LI
Sbjct: 211 PLYELSTIIFFLIPMLI 227


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 177 FLIWHFPFVWSSVFYAI 227
           F +W F  +W S++ A+
Sbjct: 128 FKVWIFGDLWCSIWLAV 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,617
Number of Sequences: 438
Number of extensions: 2425
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)