Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27k06
         (719 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    27   0.13 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    26   0.31 
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    23   3.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.1  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   6.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.9  

>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 111 NDYQALLYGQQQSIVLVNL*NYFHYENV 28
           N  Q +L   QQ++ L+NL N+F  ENV
Sbjct: 17  NQLQHVLEETQQALELINLENFFPEENV 44


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
 Frame = +1

Query: 151 KLFQTKLVARRSSDDCDELQDE--IEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQ 324
           KL Q ++ +  S +  D+ ++   +++LR +L E +N+  +      K +    +KKS  
Sbjct: 74  KLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECENK--EKSNVCLKFEEQKRRKKSLD 131

Query: 325 FVRPQKIVLTNSIDSLKRNLELMSILTGMEVQSYVVGEHC 444
            V   KI+  + IDS K NL+     T       V  E+C
Sbjct: 132 DV---KILRNDRIDSYKSNLKCDKCSTYQSNGEEVCLENC 168


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 300 PSKEEI*TICTSTENSINKL 359
           PSKE I  IC    +S+N L
Sbjct: 29  PSKEPICNICKRVYSSLNSL 48


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 328 VRPQKIVLTNSIDSLKRNLELM-SILTG 408
           V+PQ    +NSI  L++ + L+  IL G
Sbjct: 86  VQPQGTTFSNSISQLRKEVSLLYRILLG 113


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 202 ELQDEIEKLRENLKEKQNELFQLQRN 279
           E  D  EKL   + ++ +  F+LQRN
Sbjct: 215 ETNDRKEKLATGIYQRLSLSFKLQRN 240


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 214 HLEVHHNHLNYALLQ 170
           HL+ HH+HL    +Q
Sbjct: 143 HLQNHHHHLQSTAVQ 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,064
Number of Sequences: 438
Number of extensions: 3397
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)