Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27f13
         (612 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.4  
AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    22   5.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.5  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           21   9.5  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           21   9.5  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -3

Query: 418 GGANVTLYST*NCT-FFTSPGLIT 350
           GGAN+ L  T NCT    S G+++
Sbjct: 146 GGANLNLNGTVNCTSSIASSGVVS 169


>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 520 LDVLTDRVLCHHHRRRKLLETQQI 591
           +DVL  RVL    RR+ L +  QI
Sbjct: 17  MDVLRQRVLLELARRKALQDQAQI 40


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/32 (28%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 47  VKV-IAPKIFTILLNDRDISTLLHVSLSCNKT 139
           VK+ + PK+   L++ RD+  +L  ++  +K+
Sbjct: 81  VKIWVGPKLVICLIDPRDVEIILSSNVYIDKS 112


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 35  KTNEVKVIAPKIFTILLNDRDISTLLHVSLSCNKT 139
           ++ +V VI P   +    DRD+      +L+C+ T
Sbjct: 601 RSGDVAVIVPPKISPFTADRDLHLGERTTLTCSVT 635


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +1

Query: 184 EF*FYLYSKELRTETH 231
           +F +Y+YS+E  +++H
Sbjct: 334 DFPYYMYSREQYSQSH 349


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 589 FVEFLEVSSSDD 554
           F+ FL +SSSDD
Sbjct: 4   FLRFLGISSSDD 15


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 589 FVEFLEVSSSDD 554
           F+ FL +SSSDD
Sbjct: 4   FLRFLGISSSDD 15


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,997
Number of Sequences: 438
Number of extensions: 3750
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)