Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27f05
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.2  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.3  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 179 HSVTVGARAWTPATVTRNGSAARRNRTTTESSNL*TRSTAK*LAPPQ 319
           H    GA A T  T+T   +      TTT + N  T++ +    PPQ
Sbjct: 647 HPHEPGAPATTITTITTTTTTTTTTTTTTTTPNT-TQNASATTPPPQ 692


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 167 SSTPSKAPPCDC 132
           SSTPS+A  C C
Sbjct: 317 SSTPSQASSCSC 328


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 497 GTRCEGSSVGRSCPS 453
           GT+C+ S +GR  PS
Sbjct: 409 GTKCDVSLLGRFIPS 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,442
Number of Sequences: 438
Number of extensions: 3613
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)