Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27e13
         (452 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    25   0.39 
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    25   0.39 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   2.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   2.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   2.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   3.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   4.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   4.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   6.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   8.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   8.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   8.3  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 32  ICQTFITTLVCNAKLKFNIIRF 97
           IC T  T  +C     FNII+F
Sbjct: 493 ICWTITTPAICVGVFTFNIIKF 514


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 32  ICQTFITTLVCNAKLKFNIIRF 97
           IC T  T  +C     FNII+F
Sbjct: 546 ICWTITTPAICVGVFTFNIIKF 567


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +3

Query: 177 YLFPIAVAVVMFLLIG 224
           YLF +AV+ ++FL++G
Sbjct: 71  YLFNLAVSDLLFLILG 86


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 273 LRQAQIQRNEENVENVH 323
           LR+AQI+RNE    + H
Sbjct: 171 LRRAQIRRNERRTPDPH 187


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 314 KRSRHLGLYWNLPT 355
           K  R   +YWN+PT
Sbjct: 38  KTVREFNVYWNVPT 51


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 88  YPLHLTRRPEKRDDDVILS*HSTMLCPFG 174
           YP   +  PE+ D D + S H     PFG
Sbjct: 410 YPNPDSFDPERFDQDAMASRHPMHYLPFG 438


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 147 TFYYVMSIWLYL 182
           T YYVMS+W ++
Sbjct: 274 TPYYVMSLWYWI 285



 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 141 ELTFYYVMSIWLYLFPIAVAVVMFLLIGTICERR 242
           E+T+     I +Y FP+ V +  +  I     RR
Sbjct: 201 EITYSLFGMIMMYWFPLVVIIYTYTSILLEIRRR 234


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 166 PFGCICFPLRWLWSC 210
           PF    F  RW++SC
Sbjct: 56  PFSLPIFGTRWIFSC 70


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 144 LTFYYVMSIWLYLFPIAVAVV 206
           ++ YY +SI L  F  A+AVV
Sbjct: 275 ISLYYGVSICLVTFASALAVV 295


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 59  VCNAKLKFNIIRFTSRDAPKNAM 127
           + N  L FN + F   +AP N +
Sbjct: 383 IANGDLNFNEVNFRILNAPVNQL 405


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 157 MLCPFGCICF 186
           M CP GC C+
Sbjct: 759 MTCPAGCKCY 768


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 147 LTQNYIVIAFFGASREVKRIILNFNLA 67
           + QN+ +++   A   V  +++ FN+A
Sbjct: 69  IVQNFFIVSLAVADLAVAILVMPFNVA 95


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 147 LTQNYIVIAFFGASREVKRIILNFNLA 67
           + QN+ +++   A   V  +++ FN+A
Sbjct: 69  IVQNFFIVSLAVADLAVAILVMPFNVA 95


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 201 QPPQWETNTAK 169
           +PP WET++ K
Sbjct: 124 EPPPWETDSYK 134


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 147 LTQNYIVIAFFGASREVKRIILNFNLA 67
           + QN+ +++   A   V  +++ FN+A
Sbjct: 69  IVQNFFIVSLAVADLAVAILVMPFNVA 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,695
Number of Sequences: 438
Number of extensions: 3061
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)