BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte27e09
(410 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071744-1|AAL49366.1| 61|Drosophila melanogaster RH48911p pro... 67 1e-11
AY071158-1|AAL48780.1| 61|Drosophila melanogaster RE19513p pro... 67 1e-11
AE014298-2248|AAN09369.1| 57|Drosophila melanogaster CG9032-PB... 67 1e-11
AE014298-2247|AAF48526.1| 61|Drosophila melanogaster CG9032-PA... 67 1e-11
AE014297-1096|AAF54496.1| 64|Drosophila melanogaster CG31477-P... 57 8e-09
AE014297-4307|AAF56846.1| 739|Drosophila melanogaster CG1954-PA... 28 5.5
>AY071744-1|AAL49366.1| 61|Drosophila melanogaster RH48911p
protein.
Length = 61
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +1
Query: 154 MSTWRMAGLNYVNYSNIAARTLRKSLKGNLKEEASKRDKSLIRYFYWANGE 306
M+ WR AG+ Y+ YSNIAAR LR+SLK L+ +A+KRD S +++ WANG+
Sbjct: 1 MTAWRAAGITYIQYSNIAARILRESLKTGLRADAAKRDASHVKFTPWANGK 51
>AY071158-1|AAL48780.1| 61|Drosophila melanogaster RE19513p
protein.
Length = 61
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +1
Query: 154 MSTWRMAGLNYVNYSNIAARTLRKSLKGNLKEEASKRDKSLIRYFYWANGE 306
M+ WR AG+ Y+ YSNIAAR LR+SLK L+ +A+KRD S +++ WANG+
Sbjct: 1 MTAWRAAGITYIQYSNIAARILRESLKTGLRADAAKRDASHVKFTPWANGK 51
>AE014298-2248|AAN09369.1| 57|Drosophila melanogaster CG9032-PB,
isoform B protein.
Length = 57
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +1
Query: 154 MSTWRMAGLNYVNYSNIAARTLRKSLKGNLKEEASKRDKSLIRYFYWANGE 306
M+ WR AG+ Y+ YSNIAAR LR+SLK L+ +A+KRD S +++ WANG+
Sbjct: 1 MTAWRAAGITYIQYSNIAARILRESLKTGLRADAAKRDASHVKFTPWANGK 51
>AE014298-2247|AAF48526.1| 61|Drosophila melanogaster CG9032-PA,
isoform A protein.
Length = 61
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +1
Query: 154 MSTWRMAGLNYVNYSNIAARTLRKSLKGNLKEEASKRDKSLIRYFYWANGE 306
M+ WR AG+ Y+ YSNIAAR LR+SLK L+ +A+KRD S +++ WANG+
Sbjct: 1 MTAWRAAGITYIQYSNIAARILRESLKTGLRADAAKRDASHVKFTPWANGK 51
>AE014297-1096|AAF54496.1| 64|Drosophila melanogaster CG31477-PA
protein.
Length = 64
Score = 57.2 bits (132), Expect = 8e-09
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 154 MSTWRMAGLNYVNYSNIAARTLRKSLKGNLKEEASKRDKSLIRYFYWANGEILP 315
M WR G+ Y+ YSNIAAR +R++L+ L+ +A+KR+ S +++ W NG+ +P
Sbjct: 1 MKAWRDLGITYIQYSNIAARVVREALRIELRADAAKRNISHVKFTPWVNGKPVP 54
>AE014297-4307|AAF56846.1| 739|Drosophila melanogaster CG1954-PA
protein.
Length = 739
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 286 NI*LTIYHVWMLPPLSFLSEICVKYEPLCSS 194
NI LT++H LPP F++ + +E L S
Sbjct: 78 NINLTVFHDAALPPDDFVANCIISFEDLMQS 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,098,045
Number of Sequences: 53049
Number of extensions: 266007
Number of successful extensions: 575
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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