Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27e09
         (410 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.2  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   9.5  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 274  TIYHVWMLPPLSFLSEICVKYE 209
            TI   WM PPLS  + +   Y+
Sbjct: 1097 TIRISWMSPPLSAANGVITGYK 1118


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = -2

Query: 271 IYHVWMLPPLSFLSEICVKYEPLCSSSLRNSVLPFSKYS 155
           IY++W   P  F    C+       +S   +VL  + ++
Sbjct: 111 IYYIWSHFPYVFGEAFCIIQSFAAETSANATVLTITAFT 149


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 364 ITKL*FFPYPPW 329
           IT   F+PYPP+
Sbjct: 221 ITNNLFYPYPPY 232


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 388 CINRITQPITKL*F 347
           CINR+ Q  TK+ F
Sbjct: 484 CINRVVQRGTKMQF 497


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,392
Number of Sequences: 438
Number of extensions: 2063
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)