Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27e08
         (475 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010931-1|AAH10931.1|  119|Homo sapiens MEF2B protein protein.        87   3e-17
BC004449-1|AAH04449.1|  109|Homo sapiens MEF2B protein protein.        87   3e-17
BC017186-1|AAH17186.1|  331|Homo sapiens coiled-coil domain cont...    30   3.6  
AK222661-1|BAD96381.1|  331|Homo sapiens limkain beta 2 variant ...    30   3.6  
AK026124-1|BAB15366.1|  331|Homo sapiens osaminidase mRNA.  prot...    30   3.6  
AB015292-1|BAB82436.1|  331|Homo sapiens limkain beta 2 protein.       30   3.6  

>BC010931-1|AAH10931.1|  119|Homo sapiens MEF2B protein protein.
          Length = 119

 Score = 87.0 bits (206), Expect = 3e-17
 Identities = 35/99 (35%), Positives = 69/99 (69%)
 Frame = +3

Query: 123 DAELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQG 302
           + E++       ++ +E+++++ANEPS+ALYRLQEHVR++LP + + + ++ + + + QG
Sbjct: 3   EPEMQLKGKKVTDKFTESVYVLANEPSVALYRLQEHVRRSLPELAQHKADMQRWEEQSQG 62

Query: 303 RCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQL 419
             Y VEYA SAVK++  ++  F++++ +LKQ I ++  +
Sbjct: 63  AIYTVEYACSAVKNLVDSSVYFRSVEGLLKQAISIRDHM 101


>BC004449-1|AAH04449.1|  109|Homo sapiens MEF2B protein protein.
          Length = 109

 Score = 87.0 bits (206), Expect = 3e-17
 Identities = 35/99 (35%), Positives = 69/99 (69%)
 Frame = +3

Query: 123 DAELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQG 302
           + E++       ++ +E+++++ANEPS+ALYRLQEHVR++LP + + + ++ + + + QG
Sbjct: 3   EPEMQLKGKKVTDKFTESVYVLANEPSVALYRLQEHVRRSLPELAQHKADMQRWEEQSQG 62

Query: 303 RCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQL 419
             Y VEYA SAVK++  ++  F++++ +LKQ I ++  +
Sbjct: 63  AIYTVEYACSAVKNLVDSSVYFRSVEGLLKQAISIRDHM 101


>BC017186-1|AAH17186.1|  331|Homo sapiens coiled-coil domain
           containing 92 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 294 LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 434
           LQ  C D+ Y L+ VKS +          E+ K+C  L+ QLK +E+
Sbjct: 55  LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100


>AK222661-1|BAD96381.1|  331|Homo sapiens limkain beta 2 variant
           protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 294 LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 434
           LQ  C D+ Y L+ VKS +          E+ K+C  L+ QLK +E+
Sbjct: 55  LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100


>AK026124-1|BAB15366.1|  331|Homo sapiens osaminidase mRNA.
           protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 294 LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 434
           LQ  C D+ Y L+ VKS +          E+ K+C  L+ QLK +E+
Sbjct: 55  LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100


>AB015292-1|BAB82436.1|  331|Homo sapiens limkain beta 2 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 294 LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 434
           LQ  C D+ Y L+ VKS +          E+ K+C  L+ QLK +E+
Sbjct: 55  LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,607,840
Number of Sequences: 237096
Number of extensions: 926078
Number of successful extensions: 1845
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)