Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte27c01
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    29   0.061
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    25   0.99 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    25   0.99 
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    24   1.7  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    24   1.7  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    24   1.7  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    24   1.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   3.0  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   3.0  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   3.0  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   3.0  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   3.0  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   3.0  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   3.0  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   3.0  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   5.3  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   5.3  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   9.2  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   9.2  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   9.2  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   9.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.2  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 28.7 bits (61), Expect = 0.061
 Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
 Frame = +1

Query: 382 DRLAWRSVLQSLLPCVILPFIGSWCDKTGRRVLPMMVPVVGEILQCLSN--IINVIFFDI 555
           D  +W +++  ++PC+ L   G+        VL ++  V    LQ ++N  I+++   D+
Sbjct: 184 DANSWWALILVIVPCLTL--FGN--------VLVILAVVRERALQTVTNYFIVSLAVADL 233

Query: 556 PVEVLLFFDAFFPAICGGWSGMFLILFIYIS-NVTTNENRTHRLGLVNFFXYVGI 717
            V VL+   A +  + G WS    +   YI+ +VT + +    L  ++   Y+ +
Sbjct: 234 LVAVLVMPFAVYVLVNGSWSLPGFVCDFYIAMDVTCSTSSIFNLVAISIDRYIAV 288


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGWSGM 621
           NIIN+    +PV V ++   F P   G W  M
Sbjct: 115 NIINIEQIPVPVPVPVYCGNFPPRPMGPWISM 146


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGWSGM 621
           NIIN+    +PV V ++   F P   G W  M
Sbjct: 115 NIINIEQIPVPVPVPVYCGNFPPRPMGPWISM 146


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGW 612
           NIIN+    +PV V ++   F P   G W
Sbjct: 326 NIINIEQIPVPVPVPIYCGNFPPRPMGPW 354


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGW 612
           NIIN+    +PV V ++   F P   G W
Sbjct: 337 NIINIEQIPVPVPVPIYCGNFPPRPMGPW 365


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGW 612
           NIIN+    +PV V ++   F P   G W
Sbjct: 355 NIINIEQIPVPVPVPIYCGNFPPRPMGPW 383


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGW 612
           NIIN+    +PV V ++   F P   G W
Sbjct: 357 NIINIEQIPVPVPVPIYCGNFPPRPMGPW 385


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 592 ERMRRKKEELLQVYQRRSH 536
           ER+RR++E ++Q  + R H
Sbjct: 34  ERLRRRREWMIQQEREREH 52


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 592 ERMRRKKEELLQVYQRRSH 536
           ER+RR++E ++Q  + R H
Sbjct: 34  ERLRRRREWMIQQEREREH 52


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 592 ERMRRKKEELLQVYQRRSH 536
           ER+RR++E ++Q  + R H
Sbjct: 34  ERLRRRREWMIQQEREREH 52


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 592 ERMRRKKEELLQVYQRRSH 536
           ER+RR++E ++Q  + R H
Sbjct: 34  ERLRRRREWMIQQEREREH 52


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 592 ERMRRKKEELLQVYQRRSH 536
           ER+RR++E ++Q  + R H
Sbjct: 34  ERLRRRREWMIQQEREREH 52


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 592 ERMRRKKEELLQVYQRRSH 536
           ER+RR++E ++Q  + R H
Sbjct: 34  ERLRRRREWMIQQEREREH 52


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 592 ERMRRKKEELLQVYQRRSH 536
           ER+RR++E ++Q  + R H
Sbjct: 34  ERLRRRREWMIQQEREREH 52


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 592 ERMRRKKEELLQVYQRRSH 536
           ER+RR++E ++Q  + R H
Sbjct: 34  ERLRRRREWMIQQEREREH 52


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGW 612
           N I  I   +P+ V +++  F P   G W
Sbjct: 106 NYIEQIPVPVPIPVPVYYGNFLPRPMGPW 134


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGW 612
           NIIN+    +PV V +    F P   G W
Sbjct: 335 NIINIEQIPVPVPVPIHCGNFPPRPMGPW 363


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGW 612
           N I  I   +PV V +++  F P   G W
Sbjct: 106 NYIEQIPVPVPVPVPVYYGNFPPRSMGPW 134


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGW 612
           N I  I   +PV V +++  F P   G W
Sbjct: 106 NYIEQIPVPVPVPVPVYYGNFPPRSMGPW 134


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGW 612
           N I  I   +PV V +++  F P   G W
Sbjct: 106 NYIEQIPVPVPVPVPVYYGNFPPRSMGPW 134


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 526 NIINVIFFDIPVEVLLFFDAFFPAICGGW 612
           N I  I   +PV V +++  F P   G W
Sbjct: 339 NYIEQIPVPVPVPVPVYYGNFPPRSMGPW 367


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 359 FS*KVTFCEF*SRIASHIALSILRLTRQVFSKLS 258
           FS  VTF E  SRI     +S+L     +F  L+
Sbjct: 427 FSDVVTFTEICSRITPMEVVSMLNAMYSLFDTLT 460


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,356
Number of Sequences: 438
Number of extensions: 4303
Number of successful extensions: 34
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)