Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26p18
(682 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 44 2e-05
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 33 0.038
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.12
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 28 1.1
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 1.4
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 27 3.3
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 27 3.3
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 27 3.3
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 27 3.3
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc... 26 4.4
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 26 5.8
SPBC17D11.06 |spp2|pri2|DNA primase large subunit Spp2 |Schizosa... 26 5.8
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 26 5.8
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 44.0 bits (99), Expect = 2e-05
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 133 DDALKWDVDMEIQLFYAMANH-KPVGINKHFQMACIWEKLSNSVTKE-ISTQDIWKHLGS 306
D +W V E L A+ +PVGI K+F M I ++ + + I QD+W LG+
Sbjct: 28 DSVTEWSVLEETLLLKAICRGLRPVGIEKNFYMIGILREIRDGCKRSTIKAQDVWNKLGT 87
Query: 307 LYDFTMLDEAE 339
LY+ +E E
Sbjct: 88 LYNLKEFEELE 98
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 33.1 bits (72), Expect = 0.038
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -3
Query: 248 NFSHIQAIWKCLFIPTGLWLAIA*NNCISISTSHFKASSCF-VSGSSSLETIFN*LIWL 75
NF I I+ LFIP +L + + IS + F +CF + GSSS+ ++ L+WL
Sbjct: 27 NFESILEIFSVLFIP---FLCNSGKKFLQISNASFFLPACFYLLGSSSIIQLYEPLLWL 82
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 31.5 bits (68), Expect = 0.12
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +1
Query: 448 GTRKDSISALATKTRKESGSSHASTDTPSIKSEKEYXXXXXXXXXNASGPRDGSSGRKST 627
GTR S + + + S SS +S+ +PS S K ++S SS S
Sbjct: 138 GTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSK 197
Query: 628 SHKDKTPKSKISS 666
S + SK S+
Sbjct: 198 SSSSSSSSSKSSA 210
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 415 SKEVLVSEETEGTRKDSISALATKTRKESGSSHAST 522
+KEV+V ++ + +RK + L T + ++ GSS+A +
Sbjct: 326 TKEVVVEKKPDESRKQAARTLETVSEEQMGSSNAKS 361
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.9 bits (59), Expect = 1.4
Identities = 21/87 (24%), Positives = 35/87 (40%)
Frame = +1
Query: 406 KQKSKEVLVSEETEGTRKDSISALATKTRKESGSSHASTDTPSIKSEKEYXXXXXXXXXN 585
K+ KE + E ++K S+ +KE SS + +++ S +SE +
Sbjct: 52 KKSKKEAKRASSPEPSKK-SVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSES 110
Query: 586 ASGPRDGSSGRKSTSHKDKTPKSKISS 666
S + SS KT + K SS
Sbjct: 111 ESSSSESSSSESEEEVIVKTEEKKESS 137
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 26.6 bits (56), Expect = 3.3
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -3
Query: 404 IKAPNSFSGKQNVIS*LGNGIGSASS-NIVKSY----KLPKCFHI-SWVDISLVTEFDNF 243
I PN F G ++ S N +GS+SS N+V ++ K+P + D+ ++ DN
Sbjct: 374 ISIPNPFQGVESANSDAANNLGSSSSLNLVDTFLTGEKIPLWPLLQKGRDVDVIVAVDNG 433
Query: 242 SHIQAIW 222
+ +W
Sbjct: 434 DDSEWLW 440
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 349 FPNHEITFCLPENEFGALMKQKSKEVLVSEE 441
F NHE F L + G L K+ +K SEE
Sbjct: 273 FSNHETKFVLVDTSTGELKKEPTKLERASEE 303
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 26.6 bits (56), Expect = 3.3
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 436 EETEGTRKDSISALATKTRKESGSSHASTDTPSIKSEKEYXXXXXXXXXNASGPRDGSSG 615
EE +G RKD ++ + +++ ++GS T + K Y + G S
Sbjct: 1246 EEVDGQRKDILNFMNSQSLTQTGSVPKRKSTSYTRPSKSY--------RHKRGSTSYSRK 1297
Query: 616 RK-STSHKDKTPKSK 657
RK STS KD SK
Sbjct: 1298 RKYSTSQKDSRKTSK 1312
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 250 SNSVTKEISTQDIWKHLGSLYDFTMLDEAEP 342
SN V+K ++ +DI+ G YDF +P
Sbjct: 857 SNKVSKRLAAEDIYSANGGDYDFIFAASNDP 887
>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 97 MVSSEEEPETKQDDAL-KWDVDMEIQLFYAMANHKPVGINK 216
M + + E K++DAL K DV+ E+ Y+MA+ + K
Sbjct: 567 MEDEQNQLEFKRNDALTKKDVEKEVHDSYSMADESQYNLEK 607
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +1
Query: 109 EEEPETKQDDALKWDVDMEIQLFYAMANHKPVGINKHFQMACIWEKLSNSVTKEISTQDI 288
E E K++ + VD+ +QL + +H P+ + ++ + + + V E D+
Sbjct: 323 ELESNVKEEGTM---VDVWMQLCTYIDSHNPIQFHLPHSISSFFRGVGSGVMGEYIETDV 379
Query: 289 WKHLGS 306
KHL S
Sbjct: 380 LKHLKS 385
>SPBC17D11.06 |spp2|pri2|DNA primase large subunit Spp2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 428 WLVKKLKVLGRIASALLQRKHVKKAAAHTRLQIRRVLNLKKNM 556
W + +L VLG I SA+L+ K + + + + L + NM
Sbjct: 49 WAIDRLVVLGEIESAMLRNKTKNELNGIIKKILDKRLPMSSNM 91
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 25.8 bits (54), Expect = 5.8
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 382 ENEFGALMKQKSKEVLVSEETEGTRKD-SISALATKTRKESGSSHASTDTPSIKSEKE 552
+N K +S E V E + D S+S L TKT S TP KS+KE
Sbjct: 223 QNSLTPQKKIQSSERSVENEFLASPMDPSLSKLFTKTTNTEKISPTPFSTPKRKSKKE 280
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.126 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,768,872
Number of Sequences: 5004
Number of extensions: 58604
Number of successful extensions: 140
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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