Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26p17
(642 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 100 2e-22
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 67 2e-12
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 66 4e-12
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 49 7e-07
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 48 1e-06
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 39 5e-04
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 39 7e-04
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 33 0.026
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 32 0.061
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 5.3
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 5.3
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 5.3
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 7.0
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 100 bits (240), Expect = 2e-22
Identities = 49/88 (55%), Positives = 58/88 (65%)
Frame = +1
Query: 379 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 558
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 559 KNFMIQXXXXXXXXXXXXRSIYGERFED 642
NFMIQ +SIYG RF D
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPD 108
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 66.9 bits (156), Expect = 2e-12
Identities = 40/85 (47%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +1
Query: 400 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 567
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 568 MIQXXXXXXXXXXXXRSIYGERFED 642
M+Q SIYGE+FED
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFED 88
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 66.1 bits (154), Expect = 4e-12
Identities = 34/78 (43%), Positives = 40/78 (51%)
Frame = +1
Query: 409 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 588
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 589 XXXXXXXXRSIYGERFED 642
+SIYGE+F D
Sbjct: 66 TRGNGTGGKSIYGEKFPD 83
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 48.8 bits (111), Expect = 7e-07
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +1
Query: 433 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 612
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQ-GGDPTGTGRGG 64
Query: 613 RSIYGERFED 642
SIYG++F+D
Sbjct: 65 TSIYGDKFDD 74
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 48.0 bits (109), Expect = 1e-06
Identities = 31/66 (46%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Frame = +1
Query: 403 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 558
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 559 KNFMIQ 576
+ FMIQ
Sbjct: 65 QGFMIQ 70
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 39.1 bits (87), Expect = 5e-04
Identities = 28/66 (42%), Positives = 32/66 (48%)
Frame = +1
Query: 439 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 618
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 619 IYGERF 636
IYGE F
Sbjct: 78 IYGEPF 83
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 38.7 bits (86), Expect = 7e-04
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1
Query: 439 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 618
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQ-GGDPLGDGTGGES 519
Query: 619 IYGERFED 642
I+ + FED
Sbjct: 520 IWKKDFED 527
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 33.5 bits (73), Expect = 0.026
Identities = 25/70 (35%), Positives = 33/70 (47%)
Frame = +1
Query: 433 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 612
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQ-GGDPSGTGRGG 338
Query: 613 RSIYGERFED 642
+SI+G+ F+D
Sbjct: 339 QSIWGKPFKD 348
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 32.3 bits (70), Expect = 0.061
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 427 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 576
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQ 52
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 615 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 463
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 5.3
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 425 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 282
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 297 FSSFPCYFYKIRFECLFFQNLRY 229
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 253 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 405
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,484,218
Number of Sequences: 5004
Number of extensions: 48863
Number of successful extensions: 129
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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