Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26p14
         (456 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   2.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   5.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   9.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   9.5  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    20   9.5  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -3

Query: 403 DDVEGGLSNEVEGWTISSWTAASLDSCSISD*GSEWSLISNP 278
           D ++        G T S+W+     +  +S   + WSL S+P
Sbjct: 289 DHIQQATPYSAPGPTYSTWSTVQTPTTVMSPTINCWSLTSSP 330


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 316 KWSRSPVMQQSTKRLSSPQLHSIIRPRRH 402
           +W+ S V  +  KRL+ P+   I   + H
Sbjct: 217 QWNHSKVHIREDKRLTCPKCPFITEYKHH 245


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 372 TSFDNPPSTSSDNQPATSSGNQP 440
           +S  + P+T S  +PA +S N P
Sbjct: 246 SSRSHQPATKSKPRPAPASRNAP 268


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 387 PPSTSSDNQPATSSGN 434
           PP+T+S   PA+ + N
Sbjct: 35  PPATTSSGSPASVASN 50


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 210 REAAACSRRTIYAYFGSTW 154
           REAA  + R +   FG+ W
Sbjct: 461 REAATLNLRKLVDQFGAEW 479


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +1

Query: 145 LCAPCRTEICVNCAAGTRCRLPMMTTPI 228
           LC   R +   +C  G RC L     PI
Sbjct: 35  LCQSFRKQNSSSCGNGNRCDLWSEKFPI 62


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 148 KVILTLFFYLTELKKNT 98
           K I TL   L+E+K+NT
Sbjct: 103 KRIRTLLIKLSEIKENT 119


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = +1

Query: 295 TIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRRHPTTSL 417
           T+  +  KW+  P     +  +S PQ   +   RR    SL
Sbjct: 191 TMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRRRAVEISL 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,322
Number of Sequences: 336
Number of extensions: 2145
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)