Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26p14
(456 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0250 + 6266818-6267029,6267230-6267287,6267999-6268118,627... 30 1.0
01_01_0039 + 302332-302471,302981-303509,304345-304389,304572-30... 30 1.0
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 29 1.3
01_06_0113 - 26569803-26569874,26570032-26570111,26570712-26571258 29 2.3
12_02_1031 + 25537495-25537552,25538774-25538836,25538966-255392... 28 4.1
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 28 4.1
03_06_0628 - 35179951-35180265,35180653-35180889,35180982-351811... 28 4.1
01_03_0047 + 11939747-11939857,11940058-11940121,11940123-119402... 28 4.1
08_02_1252 + 25595776-25596564 27 5.4
04_04_0998 - 29996117-29996242,29996345-29996486,29996613-299968... 27 7.2
04_03_0489 + 16503325-16503747,16503916-16503978 27 7.2
03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047 27 9.5
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 27 9.5
>09_02_0250 +
6266818-6267029,6267230-6267287,6267999-6268118,
6272359-6272511,6273381-6273586,6274280-6274733,
6276573-6276610,6276923-6277046,6277184-6277246,
6277350-6277412,6277526-6278152,6278267-6278294,
6278373-6278413,6278689-6278851,6278987-6279039,
6279217-6279262,6279373-6279444,6279578-6279741,
6279968-6280099,6280249-6280565,6280721-6280892,
6281009-6281107,6281275-6281349,6281446-6281504,
6281647-6281836,6281982-6282020
Length = 1255
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +1
Query: 223 PIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRRH 402
PI + S +N N RGW + + L+L ++ TK +SP + H
Sbjct: 239 PIRQGYRHRSSNSNNHNNRGWSESKLLGLSL------AGREKTKGCNSPDQRGLQEKEHH 292
Query: 403 PTTSLQPR 426
TT L R
Sbjct: 293 ATTGLNYR 300
>01_01_0039 +
302332-302471,302981-303509,304345-304389,304572-304718,
304834-304899,304993-305058,305171-305257
Length = 359
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 307 LNLKWSRSPVMQQSTKRLSSPQLHSIIRPRRHPTTSLQPRRAINPH 444
LN +WS+ P++ ST +LSS +L S+ + P ++PH
Sbjct: 37 LNHQWSQPPMLSSSTDQLSSYELESLQSVESQLAAAAPP--TLSPH 80
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 381 DNPPSTSSDNQPATSSGNQPSS 446
D PPS SSD P T G PS+
Sbjct: 336 DVPPSPSSDTSPTTPGGGSPST 357
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 366 PSTSFDNPPSTSSDNQPAT-SSGNQP 440
PST + PPS SSD P T GN P
Sbjct: 433 PSTPCNAPPSPSSDTSPTTPGGGNYP 458
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 372 TSFDNPPSTSSDNQPATSSGNQPSS 446
T D PPS SSD P+T G SS
Sbjct: 126 TPSDTPPSPSSDTSPSTPGGGCSSS 150
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 366 PSTSFDNPPSTSSDNQPATSSG 431
PST D PPS SS P T G
Sbjct: 355 PSTPCDTPPSPSSGTSPTTPGG 376
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 372 TSFDNPPSTSSDNQPATSSG 431
T D PPS SSD P T G
Sbjct: 178 TPSDTPPSPSSDTSPTTPGG 197
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 366 PSTSFDNPPSTSSDNQPATSSGNQPSS 446
P+T PST D P+ SSG P++
Sbjct: 347 PTTPGGGSPSTPCDTPPSPSSGTSPTT 373
>01_06_0113 - 26569803-26569874,26570032-26570111,26570712-26571258
Length = 232
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 364 WTISSWTAASLDSCSISD*GSEWSLISNPSYFDLTE 257
WTI WT A ++ +I +W IS P YFDLT+
Sbjct: 197 WTIVGWTNARINRMTI-----QW--ISLPLYFDLTK 225
>12_02_1031 +
25537495-25537552,25538774-25538836,25538966-25539279,
25539361-25539612,25539698-25540411
Length = 466
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 262 SNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRP 393
+ R R RL + K +RSP +T R SSPQ H +P
Sbjct: 185 AQRRARAERLCLLDDDKDKHARSPRPPTTTSRRSSPQHHRSRKP 228
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +1
Query: 238 NQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRRHPTTSL 417
NQ P + R + T P+ + + R V+Q+ R+ LH +R R +
Sbjct: 408 NQHEKFHPGHPQNRPGKHETAPNEHFESDRVHVIQRGQPRI----LHDNLRGPREVERNA 463
Query: 418 QPRRAINPHP 447
QP + PHP
Sbjct: 464 QPAPPLLPHP 473
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 369 STSFDNPPSTSSDNQPATSSGNQPSS 446
S S D+P + S ++P+T+SG PS+
Sbjct: 97 SESLDSPNAWGSSSRPSTASGTLPSN 122
>03_06_0628 -
35179951-35180265,35180653-35180889,35180982-35181140,
35181673-35181864,35182696-35182983,35183289-35183342,
35183561-35183671,35183780-35184011,35184097-35184302
Length = 597
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 346 STKRLSSPQLHSIIRPRRHPTTSLQPRR 429
+++ L P H RPR PTT+ +PRR
Sbjct: 7 ASRALPPPPRHCARRPRAPPTTAPRPRR 34
>01_03_0047 +
11939747-11939857,11940058-11940121,11940123-11940253,
11940325-11940432,11942735-11942783,11943188-11943279,
11944394-11944468,11944553-11944658,11944740-11944786,
11944856-11944913,11945299-11945348,11945728-11945784,
11945909-11945916,11946020-11946055,11946904-11946937,
11947030-11947092,11947223-11947237
Length = 367
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 220 TPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPV 336
+P+ + S SRTP + +RG ++ PS +L S SPV
Sbjct: 326 SPVDERSISRSRTPVSSPSRGRSVSKSPSRSLSRSPSPV 364
>08_02_1252 + 25595776-25596564
Length = 262
Score = 27.5 bits (58), Expect = 5.4
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 277 RGWRLATIPSLNLKWS--RSPVMQQSTKRLSSPQLHSIIRPRRHPTTSLQPRRAINPHPK 450
R W T+PSL+ WS R V S+ ++ ++RPR P+ RR ++P P
Sbjct: 102 RQWVPTTLPSLSQIWSEVRQSVSSSSSSSTAASAAPPLVRPRL-PSR----RRCLHPLPP 156
Query: 451 KK 456
+
Sbjct: 157 SR 158
>04_04_0998 -
29996117-29996242,29996345-29996486,29996613-29996812,
29997112-29997497,29997769-29998318,29998949-29999296
Length = 583
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 70 EKYISVNHTMYFFLIQLSKKIRSR*LCAPCRTEICVNCAAGTRCRL 207
++Y + ++ +I LS+ S + PC+ CV C GT CR+
Sbjct: 279 KRYQAFLEDLHMCMICLSQSKGSNFIRLPCQHLFCVKC-LGTLCRM 323
>04_03_0489 + 16503325-16503747,16503916-16503978
Length = 161
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 292 ATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRRHPTTSLQPRRAINPHP 447
A++P +L+ R P + T +P + +R R P T+ RRA NP P
Sbjct: 26 ASLPLDSLR--REPRRRHLTSPCQNPAAAACLRRLRTPATAACLRRAGNPRP 75
>03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047
Length = 368
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +1
Query: 190 GTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSS 366
G R R + P + AS P R R + PSL +KW +P+ + R S+
Sbjct: 122 GRRGRRNLTVAPSLPLLSHASPPPEQLQRRRRRGSPFPSLLVKWLGAPMRPEHEGRNSA 180
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 369 STSFDNPPSTSSDNQPATSS 428
S S D PPST + +PATSS
Sbjct: 316 SVSHDRPPSTVAAPKPATSS 335
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,765,446
Number of Sequences: 37544
Number of extensions: 223508
Number of successful extensions: 858
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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