Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26p14
(456 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 34 0.064
SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_16098| Best HMM Match : Abhydrolase_1 (HMM E-Value=4.5e-22) 29 1.4
SB_40708| Best HMM Match : SRCR (HMM E-Value=0) 29 1.4
SB_50931| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 29 1.8
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_44410| Best HMM Match : RCSD (HMM E-Value=7.2) 29 2.4
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 29 2.4
SB_51291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4) 28 3.2
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 28 4.2
SB_8210| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 28 4.2
SB_6168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_53154| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 27 7.4
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_6588| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 9.7
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 33.9 bits (74), Expect = 0.064
Identities = 30/97 (30%), Positives = 46/97 (47%)
Frame = +1
Query: 136 SR*LCAPCRTEICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWRLATIPSLNL 315
SR LC+P T V +A + + TTP T QS + T + + PS++L
Sbjct: 523 SRPLCSPDLTTPTVLPSAAS-VSPKVATTPTPTMEQSVFWPRELKFTFTFSGSKRPSIDL 581
Query: 316 KWSRSPVMQQSTKRLSSPQLHSIIRPRRHPTTSLQPR 426
+ +PV + TK+ SS + RPR + S +PR
Sbjct: 582 EVETTPVPSKKTKKESSTKGTGPGRPRSDSSGSSRPR 618
>SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 32.7 bits (71), Expect = 0.15
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G LP E GWL ++ G L +E GW
Sbjct: 581 GWLPSETNGWLPSEIRGWLPSETHGW 606
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G LP E GWL + G L +E GW
Sbjct: 751 GWLPSETCGWLPSETHGRLPSETRGW 776
Score = 31.9 bits (69), Expect = 0.26
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 433 LPDEVAGWLSDDVEGGLSNEVEGW 362
LP E GWL + G L +E+ GW
Sbjct: 575 LPSETNGWLPSETNGWLPSEIRGW 598
Score = 31.9 bits (69), Expect = 0.26
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G LP E GWL + G L +E GW
Sbjct: 647 GWLPSETLGWLPSETRGWLPSETRGW 672
Score = 31.5 bits (68), Expect = 0.34
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G LP E GWL + G L +E GW
Sbjct: 727 GWLPSETHGWLPSETRGWLPSETRGW 752
Score = 30.7 bits (66), Expect = 0.60
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 433 LPDEVAGWLSDDVEGGLSNEVEGW 362
LP E GWL + G L +E GW
Sbjct: 721 LPSETHGWLPSETHGWLPSETRGW 744
Score = 30.3 bits (65), Expect = 0.79
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G LP E GWL + G L +E GW
Sbjct: 735 GWLPSETRGWLPSETRGWLPSETCGW 760
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G LP E GWL + G L +E + W
Sbjct: 655 GWLPSETRGWLPSETRGWLPSETQEW 680
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G LP E GWL + + L +E GW
Sbjct: 663 GWLPSETRGWLPSETQEWLPSETHGW 688
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G LP E GWL + + L +E GW
Sbjct: 703 GWLPSETRGWLPSETQEWLPSETHGW 728
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 433 LPDEVAGWLSDDVEGGLSNEVEGW 362
LP E GWL + G L +E + W
Sbjct: 697 LPSETRGWLPSETRGWLPSETQEW 720
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G LP E WL + G L +E GW
Sbjct: 711 GWLPSETQEWLPSETHGWLPSETHGW 736
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G P E GWL + G L +E GW
Sbjct: 639 GGYPSETHGWLPSETLGWLPSETRGW 664
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 439 G*LPDEVAGWLSDDVEGGLSNEVEGW 362
G LP E WL + G L +E GW
Sbjct: 687 GWLPSETHEWLPSETRGWLPSETRGW 712
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3
Query: 433 LPDEVAGWLSDDVEGGLSNEVEGW 362
LP E GWL + L +E GW
Sbjct: 681 LPSETHGWLPSETHEWLPSETRGW 704
>SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1104
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 307 LNLKWSRSPVMQQSTKRLSSPQLHSIIRPRRHPTTSLQPRR 429
L+LK RS + S + + + HSII R P SL PRR
Sbjct: 321 LSLKQLRSWIPDLSQRCFAEARRHSIIYGRGQPVQSLYPRR 361
>SB_16098| Best HMM Match : Abhydrolase_1 (HMM E-Value=4.5e-22)
Length = 863
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -3
Query: 427 DEVAGWLSDDVEGG--LSNEVEGWTISSWTAASLDSCSISD*GSEW 296
D+ A W+ DD E + ++ W I S AAS+ S +D S W
Sbjct: 480 DQEAAWVIDDQEAAWVIDDQRPFWVIDSQGAASVRCSSTADSRSRW 525
>SB_40708| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1976
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 148 CAPCRTEICVNCAAGTRCR 204
C+PC T +CV CA G R
Sbjct: 294 CSPCDTSVCVTCANGPNGR 312
>SB_50931| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 348
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +1
Query: 238 NQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRRHPTTSL 417
NQ+AS TPSN RG + A++ + + + P +Q + + S +L + PR ++
Sbjct: 91 NQTASATPSNAKPRGKKPASVKTPPVANEKGPDLQGNAEVNMSVELPA---PRTAVQDAV 147
Query: 418 QPRRAINP 441
P I P
Sbjct: 148 SPIPRIKP 155
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 322 SRSPVMQQSTKRLSSPQLHSIIRPRRHPTTSLQPRRAINPHP 447
S SP ++ S +S+P +S R+P S P +++P+P
Sbjct: 588 SSSPSVRPSPNLISNPNRNSNSNSNRNPNPSSNPSPSLSPNP 629
>SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +1
Query: 208 PMMTTPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSII 387
P P + S P R L S + S+SPV ++R++S +
Sbjct: 289 PTFARPTDVAKTSGKPQPMKALPRVSTLGATRSASASCSKSPVRPMVSRRIASAGSSQGV 348
Query: 388 RPRRH--PTTSLQPRR 429
PR+ PT QP+R
Sbjct: 349 TPRQSGTPTQGAQPKR 364
>SB_44410| Best HMM Match : RCSD (HMM E-Value=7.2)
Length = 117
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 345 VHEEIVQPSTS-FDNPPSTSSDNQPATSSGN 434
V PS S NPPS SSD++P+T + N
Sbjct: 16 VDRSSASPSNSTVSNPPSLSSDSEPSTPATN 46
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 28.7 bits (61), Expect = 2.4
Identities = 8/31 (25%), Positives = 25/31 (80%)
Frame = +3
Query: 363 QPSTSFDNPPSTSSDNQPATSSGNQPSSKKK 455
+P+T+ ++ P+T+++++P T++ ++P++ K
Sbjct: 3129 KPTTNNNSKPTTNNNSKPTTNNNSKPTTNNK 3159
Score = 26.6 bits (56), Expect = 9.7
Identities = 7/28 (25%), Positives = 24/28 (85%)
Frame = +3
Query: 363 QPSTSFDNPPSTSSDNQPATSSGNQPSS 446
+P+T+ ++ P+T+++++P T++ ++P++
Sbjct: 3121 KPTTNNNSKPTTNNNSKPTTNNNSKPTT 3148
>SB_51291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 9/46 (19%)
Frame = +1
Query: 337 MQQSTKRLSSPQLHSIIR---------PRRHPTTSLQPRRAINPHP 447
++ S +++SSP LHS + P RH TTS +P A+ HP
Sbjct: 41 VRYSERKVSSPCLHSAAKDTGDGESHNPSRHITTSSRPFMALMSHP 86
>SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4)
Length = 1633
Score = 28.3 bits (60), Expect = 3.2
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 223 PIM--TSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSP-QLHSIIRP 393
P+M TS+ + +R + + W+L S S + ++S + SP Q S+I+
Sbjct: 515 PVMQSTSSITEARQFDSGDLDSWKLGLACSEGGPPSLDEIHRESNTSIDSPRQESSLIKK 574
Query: 394 RR--HPTTSLQPRRAIN 438
+ + TTS+QPR++++
Sbjct: 575 LKELYSTTSIQPRKSVS 591
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 27.9 bits (59), Expect = 4.2
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 232 TSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRRHPTT 411
++++ SR+ S +R R + S + SRSP +S +R SPQ + R P +
Sbjct: 206 STDKRKSRSRSRSRSRSHRKSRKRSESRSRSRSPKKSRSARRSRSPQKSRSPQRSRSPRS 265
Query: 412 SLQPR 426
S + R
Sbjct: 266 SKRYR 270
Score = 27.1 bits (57), Expect = 7.4
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 238 NQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRRHPTTSL 417
++ +SR+PS + + S + + SR +S R SP+ R R P S
Sbjct: 198 DRKSSRSPSTDKRKSRSRSRSRSRSHRKSRK--RSESRSRSRSPKKSRSARRSRSPQKSR 255
Query: 418 QPRRAINPHPKKK 456
P+R+ +P K+
Sbjct: 256 SPQRSRSPRSSKR 268
>SB_8210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1935
Score = 27.9 bits (59), Expect = 4.2
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +1
Query: 202 RLPMMTTPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSP---VMQQSTKRLSSPQ 372
++ ++T P T + + +R P RG R + IP S+ P SP+
Sbjct: 1594 KISLLTEPDTTVDSARARYP-----RGHRKSQIPPWTRCQSKKPPWTAPDPPVDSARSPR 1648
Query: 373 LHSIIRPRRHPTTSLQPRRAINPHPKKK 456
S I P P + RA NPH +++
Sbjct: 1649 GQSQIPPWTEPDPPVDSARARNPHGQRQ 1676
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 27.9 bits (59), Expect = 4.2
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 238 NQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRRHPTTSL 417
++SASR+ S R W + PSL+ + SRS +S R S + P ++ T++
Sbjct: 421 SRSASRSYSRSPVRSWSRSHSPSLSPQRSRS--YSRSRSRSFSKSISGSPTP-KYTRTTV 477
Query: 418 QPR 426
+PR
Sbjct: 478 KPR 480
>SB_6168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 360 VQPSTSFDNPPSTSSDNQPA-TSSGNQPSSKKK 455
V S+S ++P ++DNQP +SS N PS K
Sbjct: 182 VSTSSSTEHPVEETTDNQPVESSSDNYPSETAK 214
>SB_53154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 433 LPDEVAGWLSDDVEGGLSNEVEGWTISSWTA 341
L D +AGWL+ + G L+ + GW ++ W A
Sbjct: 225 LTDWMAGWLAGWLAGWLAGWLAGW-LAGWLA 254
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 390 PSTSSDNQPATSSGNQPSSKK 452
PSTSS + PAT N PS K
Sbjct: 296 PSTSSKHYPATIDQNSPSKNK 316
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 348 HEEIVQPSTSFDNPPSTSSDNQPATSSGNQPSSK 449
+++ QP+ N P+ NQP NQP+++
Sbjct: 210 YKQTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQ 243
>SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 26.6 bits (56), Expect = 9.7
Identities = 24/70 (34%), Positives = 30/70 (42%)
Frame = +1
Query: 220 TPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRR 399
TP T N SRTP R L++ S+ SR PV ++ L SP L +
Sbjct: 593 TPPSTVN---SRTPVTRAQSTPSLSS--SVTSPTSRQPVTTGGSRALKSPFLDQDKKGPA 647
Query: 400 HPTTSLQPRR 429
PTT P R
Sbjct: 648 SPTTPTTPSR 657
>SB_6588| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 355
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 CAPCRT-EICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRG 282
C C E + + T M+TT + +S ++AS N NT G
Sbjct: 296 CVQCGVKEDVMRSSKATSAERSMLTTALPSSVETASECKDNNNTNG 341
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,435,914
Number of Sequences: 59808
Number of extensions: 266988
Number of successful extensions: 1055
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 920703675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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