Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26p09
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0912 + 25896152-25896451,25896528-25897296,25897492-258976... 32 0.52
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 30 2.1
11_04_0216 - 14954047-14956098 29 3.7
11_01_0532 + 4201374-4201401,4201475-4202652,4204316-4204670,420... 29 3.7
07_01_1016 + 8641370-8641393,8642676-8643012,8643292-8643326 29 3.7
05_02_0104 - 6638018-6638599,6639284-6639632,6641843-6642048 29 3.7
04_04_0084 - 22618729-22619010,22619103-22619732,22619933-22620061 29 3.7
05_05_0015 + 21530547-21531047 29 4.8
05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425... 29 4.8
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 29 4.8
09_04_0338 - 16801189-16801524,16801605-16801679,16801758-168018... 28 6.4
03_01_0401 - 3108477-3108689,3108787-3108933,3109022-3109234,310... 28 6.4
02_01_0347 - 2493570-2493572,2493626-2493853 28 6.4
01_07_0054 - 40779336-40779599,40779734-40779848,40779998-407801... 28 6.4
>06_03_0912 + 25896152-25896451,25896528-25897296,25897492-25897658,
25898932-25901013,25901155-25901730,25904503-25905648,
25907056-25908693
Length = 2225
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +1
Query: 571 IDKVIDSCPAFKEPECICHEESLSSLSSNATWDIEYTP 684
IDK +DSCP P+CI +SL L DIE P
Sbjct: 2111 IDKCVDSCPV---PKCILGWKSLQKLEIRRCEDIELLP 2145
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 427 EEQAKVEARKMVKLKKQRDAEIRKALAEAVED 522
EE+ K E RK+ +LKKQ+D E KA +++
Sbjct: 26 EEKEKEEQRKIQELKKQQDEEREKAAFRKLQE 57
>11_04_0216 - 14954047-14956098
Length = 683
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +1
Query: 367 EDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVED 522
E+ ++CDP+ +I K P + +R++++ + Q +K L E E+
Sbjct: 263 EEKRLECDPVSVEIKKCEPPAKSLSSVSRRILQWEAQASGNFKKVLDEMEEN 314
>11_01_0532 +
4201374-4201401,4201475-4202652,4204316-4204670,
4204791-4204864,4206965-4207056,4207500-4207573,
4207680-4207822,4207889-4207909
Length = 654
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 562 LTAIDKVIDSCPAFKEPECICHEESLSSLSSNA 660
LTA K ID F P+C E +SSL+SN+
Sbjct: 328 LTAPLKSIDGLILFDRPKCNLQAEDISSLASNS 360
>07_01_1016 + 8641370-8641393,8642676-8643012,8643292-8643326
Length = 131
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 417 AQPRGASESGSTEDGQAEEAARRRNPKGPGR 509
A G G E+G+ EEAA R P+G R
Sbjct: 60 AAEAGGGGVGEAEEGEEEEAAETRGPRGCAR 90
>05_02_0104 - 6638018-6638599,6639284-6639632,6641843-6642048
Length = 378
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +3
Query: 414 EAQPRGASESGSTEDGQAEEAARRRNPKGPGRSRRR 521
EA GA+ SGS A RR P PGR RRR
Sbjct: 344 EAASLGAAGSGSPRPDPTPAAGPRRRP-APGRRRRR 378
>04_04_0084 - 22618729-22619010,22619103-22619732,22619933-22620061
Length = 346
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 390 IAVNIWILVRCYLCQIFQWINLRSRSVCRIPQPPHFGW 277
IA+N ILV C++ +F + +S+ +CR HF W
Sbjct: 23 IAINYGILVACWMLHMFDVV--QSKLICR-AMALHFSW 57
>05_05_0015 + 21530547-21531047
Length = 166
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 401 LRLSRSAAPR-SKRKWKHGRW 460
LR++ +AAP+ S R+W+ GRW
Sbjct: 87 LRMAVAAAPKTSHRRWRQGRW 107
>05_04_0288 +
19839597-19839821,19841882-19842107,19842494-19842582,
19845184-19845387,19845463-19845717,19845796-19846011,
19846611-19846766,19846880-19847039,19847702-19847788,
19847789-19847940,19848006-19848143,19848714-19848788,
19849166-19849444
Length = 753
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Frame = +1
Query: 295 LWNAADTPGAK---VNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVK 465
LWN DTP A+ + + L ++P+ C L ++I+K + +V+ +K
Sbjct: 416 LWNLMDTPTAEQKCFDHVTSLISVSPSTKMPQGC--LARELIEK----VEVEVKRLNCLK 469
Query: 466 LKKQRDAEIRKALAEAVEDICKCAYMDVYCN-DLTAIDKVIDS 591
K ++ ++K + +E+I K +MD+ + + ++ +IDS
Sbjct: 470 ASKMKELVLKKMI--ELEEIYKSVHMDIDSDYERRILNDLIDS 510
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 412 KKRSPEEQAKVEARKMVKLKKQRDAEIRKALAE 510
KK+ EE+AK E + KLK+ + AE AL E
Sbjct: 546 KKKEKEEKAKQEKEEKAKLKEPKAAEEDLALKE 578
>09_04_0338 -
16801189-16801524,16801605-16801679,16801758-16801831,
16801972-16802059,16802185-16802336,16802423-16802582,
16802913-16803128,16803487-16803744,16804202-16804231,
16804738-16804941,16805790-16805855
Length = 552
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 412 KKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDICKCAYMD 546
++RS ++ E ++ KLK +R EI +E+IC+ A+++
Sbjct: 251 EQRSRIDKMGAEVERLTKLKARRLKEIFMKKRSELEEICRSAHIE 295
>03_01_0401 -
3108477-3108689,3108787-3108933,3109022-3109234,
3109321-3109938,3110045-3110584,3110941-3111041,
3111208-3111325,3111450-3111535,3111888-3112002
Length = 716
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 244 PCMFLRPGLPVPAK-MGWLWNAA--DTPGAKVNPLKDLTEIAPN 366
P + +P PVP+ G L +A D P AK +P K T APN
Sbjct: 179 PTSYYQPPTPVPSTTQGDLQPSANPDKPTAKADPAKTTTNGAPN 222
>02_01_0347 - 2493570-2493572,2493626-2493853
Length = 76
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 438 ESGSTEDGQAEEAARRRNPKGPGRSRRRHLQMCLYGC 548
E G E + E+A RRR G S+RR + ++GC
Sbjct: 28 EEGGEERCEEEKAERRRGGGGERASKRRCICTRMWGC 64
>01_07_0054 -
40779336-40779599,40779734-40779848,40779998-40780181,
40780322-40780393,40780485-40780611,40780830-40781011,
40781099-40781249
Length = 364
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 362 GAISVRSFNGLTFAPGVSAAFHSHPILAGTGKPGLKNMHGLWPMT 228
G++S +G + APGV F +A GL ++H L P T
Sbjct: 146 GSVSTH-LHGSSHAPGVKLEFKQRLSIAHGAAKGLNHLHSLTPPT 189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,817,848
Number of Sequences: 37544
Number of extensions: 391859
Number of successful extensions: 1464
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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