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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26p09
         (715 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525413-1|AAP80791.1|  962|Homo sapiens cardiac titin N2BA isof...    34   0.44 
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          33   1.3  
X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  33   1.3  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                33   1.3  
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    33   1.3  
BT006817-1|AAP35463.1|  387|Homo sapiens tetratricopeptide repea...    31   4.1  
BC001276-1|AAH01276.1|  387|Homo sapiens tetratricopeptide repea...    31   4.1  
AL139244-6|CAI18995.1|  398|Homo sapiens tetratricopeptide repea...    31   4.1  
AL139244-5|CAI18994.1|  387|Homo sapiens tetratricopeptide repea...    31   4.1  
AL139244-4|CAI18993.1|  133|Homo sapiens tetratricopeptide repea...    31   4.1  
AK222562-1|BAD96282.1|  387|Homo sapiens tetratricopeptide repea...    31   4.1  
AF073887-1|AAD19853.1|  356|Homo sapiens tetratricopeptide repea...    31   4.1  
AF063602-1|AAG43161.1|  387|Homo sapiens brain my044 protein pro...    31   4.1  
AF329266-1|AAK07476.1|  481|Homo sapiens CUG-BP and ETR-3 like f...    31   5.4  
BC047522-1|AAH47522.1|  402|Homo sapiens BRUNOL5 protein protein.      30   7.2  
BC028101-1|AAH28101.1|  485|Homo sapiens bruno-like 5, RNA bindi...    30   7.2  
AB209575-1|BAD92812.1|  520|Homo sapiens glucose phosphate isome...    30   7.2  
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca...    30   9.5  
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca...    30   9.5  
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c...    30   9.5  
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe...    30   9.5  
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ...    30   9.5  
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ...    30   9.5  
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ...    30   9.5  
AB209902-1|BAD93139.1|  983|Homo sapiens DNA polymerase epsilon ...    30   9.5  

>AF525413-1|AAP80791.1|  962|Homo sapiens cardiac titin N2BA isoform
           protein.
          Length = 962

 Score = 34.3 bits (75), Expect = 0.44
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +1

Query: 310 DTPGAKV-NPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 474
           + P AKV    K + ++ P   P    + ++  +++KR  EE+ KVE +K+ K+KK
Sbjct: 808 EAPPAKVPGGEKKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 863


>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +1

Query: 340  KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 474
            K + ++ P   P    + ++  +++KR  EE+ KVE +K+ K+KK
Sbjct: 7617 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 7661


>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +1

Query: 340  KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 474
            K + ++ P   P    + ++  +++KR  EE+ KVE +K+ K+KK
Sbjct: 4433 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 4477


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +1

Query: 340   KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 474
             K + ++ P   P    + ++  +++KR  EE+ KVE +K+ K+KK
Sbjct: 11857 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 11901


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +1

Query: 340  KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 474
            K + ++ P   P    + ++  +++KR  EE+ KVE +K+ K+KK
Sbjct: 4433 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 4477


>BT006817-1|AAP35463.1|  387|Homo sapiens tetratricopeptide repeat
           domain 4 protein.
          Length = 387

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
           +EI P E+P + C   ++F   ++RSPEEQAK    +     K++D   +KA+    E +
Sbjct: 51  SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106

Query: 526 -CKCAYMDV 549
             KCA  D+
Sbjct: 107 KKKCADPDL 115


>BC001276-1|AAH01276.1|  387|Homo sapiens tetratricopeptide repeat
           domain 4 protein.
          Length = 387

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
           +EI P E+P + C   ++F   ++RSPEEQAK    +     K++D   +KA+    E +
Sbjct: 51  SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106

Query: 526 -CKCAYMDV 549
             KCA  D+
Sbjct: 107 KKKCADPDL 115


>AL139244-6|CAI18995.1|  398|Homo sapiens tetratricopeptide repeat
           domain 4 protein.
          Length = 398

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
           +EI P E+P + C   ++F   ++RSPEEQAK    +     K++D   +KA+    E +
Sbjct: 62  SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 117

Query: 526 -CKCAYMDV 549
             KCA  D+
Sbjct: 118 KKKCADPDL 126


>AL139244-5|CAI18994.1|  387|Homo sapiens tetratricopeptide repeat
           domain 4 protein.
          Length = 387

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
           +EI P E+P + C   ++F   ++RSPEEQAK    +     K++D   +KA+    E +
Sbjct: 51  SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106

Query: 526 -CKCAYMDV 549
             KCA  D+
Sbjct: 107 KKKCADPDL 115


>AL139244-4|CAI18993.1|  133|Homo sapiens tetratricopeptide repeat
           domain 4 protein.
          Length = 133

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
           +EI P E+P + C   ++F   ++RSPEEQAK    +     K++D   +KA+    E +
Sbjct: 51  SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106

Query: 526 -CKCAYMDV 549
             KCA  D+
Sbjct: 107 KKKCADPDL 115


>AK222562-1|BAD96282.1|  387|Homo sapiens tetratricopeptide repeat
           domain 4 variant protein.
          Length = 387

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
           +EI P E+P + C   ++F   ++RSPEEQAK    +     K++D   +KA+    E +
Sbjct: 51  SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106

Query: 526 -CKCAYMDV 549
             KCA  D+
Sbjct: 107 KKKCADPDL 115


>AF073887-1|AAD19853.1|  356|Homo sapiens tetratricopeptide repeat
           protein 4 protein.
          Length = 356

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
           +EI P E+P + C   ++F   ++RSPEEQAK    +     K++D   +KA+    E +
Sbjct: 51  SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106

Query: 526 -CKCAYMDV 549
             KCA  D+
Sbjct: 107 KKKCADPDL 115


>AF063602-1|AAG43161.1|  387|Homo sapiens brain my044 protein
           protein.
          Length = 387

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
           +EI P E+P + C   ++F   ++RSPEEQAK    +     K++D   +KA+    E +
Sbjct: 51  SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106

Query: 526 -CKCAYMDV 549
             KCA  D+
Sbjct: 107 KKKCADPDL 115


>AF329266-1|AAK07476.1|  481|Homo sapiens CUG-BP and ETR-3 like
           factor 5 protein.
          Length = 481

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = -3

Query: 407 ILNTKGSQSTYGSSFGAISVR-----SFNGLTFAPGVSAA-FHSHPILAGTGKPGL 258
           +L+T GS  + G +F    ++     S NGL   P   A+  HS P+L  T  PGL
Sbjct: 258 VLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPVAPASGLHSPPLLGTTAVPGL 313


>BC047522-1|AAH47522.1|  402|Homo sapiens BRUNOL5 protein protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = -3

Query: 407 ILNTKGSQSTYGSSFGAISVR-----SFNGLTFAPGVSAA-FHSHPILAGTGKPGL 258
           +L+T GS  + G +F    ++     S NGL   P   A+  HS P+L  T  PGL
Sbjct: 258 VLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGL 313


>BC028101-1|AAH28101.1|  485|Homo sapiens bruno-like 5, RNA binding
           protein (Drosophila) protein.
          Length = 485

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = -3

Query: 407 ILNTKGSQSTYGSSFGAISVR-----SFNGLTFAPGVSAA-FHSHPILAGTGKPGL 258
           +L+T GS  + G +F    ++     S NGL   P   A+  HS P+L  T  PGL
Sbjct: 258 VLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGL 313


>AB209575-1|BAD92812.1|  520|Homo sapiens glucose phosphate
           isomerase variant protein.
          Length = 520

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -1

Query: 697 NSQKVGYTQCPKSRYWTMNLVIPRGIYTLVL*RLDNCL*PYRWQLDHYNRHP 542
           N +K+ YT+  +    +    +P G+Y L + R+  CL P+ W +   N  P
Sbjct: 407 NGEKINYTEVSRPHIPSGASFLPFGVY-LTVSRITLCLHPFSWAMLLLNEGP 457


>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
           catalytic subunit protein.
          Length = 2285

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
           C F +PG     KM W W     P ++    +   ++   + P +  +    +   + S 
Sbjct: 653 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 711

Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
           EEQAK E R++    ++   +I    + E +  IC+
Sbjct: 712 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 747


>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
           catalytic subunit protein.
          Length = 2257

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
           C F +PG     KM W W     P ++    +   ++   + P +  +    +   + S 
Sbjct: 625 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 683

Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
           EEQAK E R++    ++   +I    + E +  IC+
Sbjct: 684 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 719


>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
           catalytic polypeptide protein.
          Length = 2286

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
           C F +PG     KM W W     P ++    +   ++   + P +  +    +   + S 
Sbjct: 654 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 712

Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
           EEQAK E R++    ++   +I    + E +  IC+
Sbjct: 713 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 748


>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
           epsilon protein.
          Length = 2265

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
           C F +PG     KM W W     P ++    +   ++   + P +  +    +   + S 
Sbjct: 633 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 691

Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
           EEQAK E R++    ++   +I    + E +  IC+
Sbjct: 692 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 727


>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
           catalytic subunit protein isoform c protein.
          Length = 2243

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
           C F +PG     KM W W     P ++    +   ++   + P +  +    +   + S 
Sbjct: 611 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 669

Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
           EEQAK E R++    ++   +I    + E +  IC+
Sbjct: 670 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 705


>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
           catalytic subunit protein isoform b protein.
          Length = 2286

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
           C F +PG     KM W W     P ++    +   ++   + P +  +    +   + S 
Sbjct: 654 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 712

Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
           EEQAK E R++    ++   +I    + E +  IC+
Sbjct: 713 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 748


>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
           catalytic subunit protein isoform a protein.
          Length = 2297

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
           C F +PG     KM W W     P ++    +   ++   + P +  +    +   + S 
Sbjct: 665 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 723

Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
           EEQAK E R++    ++   +I    + E +  IC+
Sbjct: 724 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 759


>AB209902-1|BAD93139.1|  983|Homo sapiens DNA polymerase epsilon
           catalytic subunit variant protein.
          Length = 983

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
           C F +PG     KM W W     P ++    +   ++   + P +  +    +   + S 
Sbjct: 462 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 520

Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
           EEQAK E R++    ++   +I    + E +  IC+
Sbjct: 521 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 556


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,234,537
Number of Sequences: 237096
Number of extensions: 2231543
Number of successful extensions: 6138
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6133
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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