BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26p09
(715 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF525413-1|AAP80791.1| 962|Homo sapiens cardiac titin N2BA isof... 34 0.44
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein. 33 1.3
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 33 1.3
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 33 1.3
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 33 1.3
BT006817-1|AAP35463.1| 387|Homo sapiens tetratricopeptide repea... 31 4.1
BC001276-1|AAH01276.1| 387|Homo sapiens tetratricopeptide repea... 31 4.1
AL139244-6|CAI18995.1| 398|Homo sapiens tetratricopeptide repea... 31 4.1
AL139244-5|CAI18994.1| 387|Homo sapiens tetratricopeptide repea... 31 4.1
AL139244-4|CAI18993.1| 133|Homo sapiens tetratricopeptide repea... 31 4.1
AK222562-1|BAD96282.1| 387|Homo sapiens tetratricopeptide repea... 31 4.1
AF073887-1|AAD19853.1| 356|Homo sapiens tetratricopeptide repea... 31 4.1
AF063602-1|AAG43161.1| 387|Homo sapiens brain my044 protein pro... 31 4.1
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 31 5.4
BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein. 30 7.2
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 30 7.2
AB209575-1|BAD92812.1| 520|Homo sapiens glucose phosphate isome... 30 7.2
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca... 30 9.5
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca... 30 9.5
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c... 30 9.5
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe... 30 9.5
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ... 30 9.5
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ... 30 9.5
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ... 30 9.5
AB209902-1|BAD93139.1| 983|Homo sapiens DNA polymerase epsilon ... 30 9.5
>AF525413-1|AAP80791.1| 962|Homo sapiens cardiac titin N2BA isoform
protein.
Length = 962
Score = 34.3 bits (75), Expect = 0.44
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 310 DTPGAKV-NPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 474
+ P AKV K + ++ P P + ++ +++KR EE+ KVE +K+ K+KK
Sbjct: 808 EAPPAKVPGGEKKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 863
>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
Length = 7962
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 340 KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 474
K + ++ P P + ++ +++KR EE+ KVE +K+ K+KK
Sbjct: 7617 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 7661
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 340 KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 474
K + ++ P P + ++ +++KR EE+ KVE +K+ K+KK
Sbjct: 4433 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 4477
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 340 KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 474
K + ++ P P + ++ +++KR EE+ KVE +K+ K+KK
Sbjct: 11857 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 11901
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 340 KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 474
K + ++ P P + ++ +++KR EE+ KVE +K+ K+KK
Sbjct: 4433 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 4477
>BT006817-1|AAP35463.1| 387|Homo sapiens tetratricopeptide repeat
domain 4 protein.
Length = 387
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 526 -CKCAYMDV 549
KCA D+
Sbjct: 107 KKKCADPDL 115
>BC001276-1|AAH01276.1| 387|Homo sapiens tetratricopeptide repeat
domain 4 protein.
Length = 387
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 526 -CKCAYMDV 549
KCA D+
Sbjct: 107 KKKCADPDL 115
>AL139244-6|CAI18995.1| 398|Homo sapiens tetratricopeptide repeat
domain 4 protein.
Length = 398
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 62 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 117
Query: 526 -CKCAYMDV 549
KCA D+
Sbjct: 118 KKKCADPDL 126
>AL139244-5|CAI18994.1| 387|Homo sapiens tetratricopeptide repeat
domain 4 protein.
Length = 387
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 526 -CKCAYMDV 549
KCA D+
Sbjct: 107 KKKCADPDL 115
>AL139244-4|CAI18993.1| 133|Homo sapiens tetratricopeptide repeat
domain 4 protein.
Length = 133
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 526 -CKCAYMDV 549
KCA D+
Sbjct: 107 KKKCADPDL 115
>AK222562-1|BAD96282.1| 387|Homo sapiens tetratricopeptide repeat
domain 4 variant protein.
Length = 387
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 526 -CKCAYMDV 549
KCA D+
Sbjct: 107 KKKCADPDL 115
>AF073887-1|AAD19853.1| 356|Homo sapiens tetratricopeptide repeat
protein 4 protein.
Length = 356
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 526 -CKCAYMDV 549
KCA D+
Sbjct: 107 KKKCADPDL 115
>AF063602-1|AAG43161.1| 387|Homo sapiens brain my044 protein
protein.
Length = 387
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 349 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 525
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 526 -CKCAYMDV 549
KCA D+
Sbjct: 107 KKKCADPDL 115
>AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like
factor 5 protein.
Length = 481
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = -3
Query: 407 ILNTKGSQSTYGSSFGAISVR-----SFNGLTFAPGVSAA-FHSHPILAGTGKPGL 258
+L+T GS + G +F ++ S NGL P A+ HS P+L T PGL
Sbjct: 258 VLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPVAPASGLHSPPLLGTTAVPGL 313
>BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein.
Length = 402
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = -3
Query: 407 ILNTKGSQSTYGSSFGAISVR-----SFNGLTFAPGVSAA-FHSHPILAGTGKPGL 258
+L+T GS + G +F ++ S NGL P A+ HS P+L T PGL
Sbjct: 258 VLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGL 313
>BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA binding
protein (Drosophila) protein.
Length = 485
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = -3
Query: 407 ILNTKGSQSTYGSSFGAISVR-----SFNGLTFAPGVSAA-FHSHPILAGTGKPGL 258
+L+T GS + G +F ++ S NGL P A+ HS P+L T PGL
Sbjct: 258 VLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGL 313
>AB209575-1|BAD92812.1| 520|Homo sapiens glucose phosphate
isomerase variant protein.
Length = 520
Score = 30.3 bits (65), Expect = 7.2
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -1
Query: 697 NSQKVGYTQCPKSRYWTMNLVIPRGIYTLVL*RLDNCL*PYRWQLDHYNRHP 542
N +K+ YT+ + + +P G+Y L + R+ CL P+ W + N P
Sbjct: 407 NGEKINYTEVSRPHIPSGASFLPFGVY-LTVSRITLCLHPFSWAMLLLNEGP 457
>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2285
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
C F +PG KM W W P ++ + ++ + P + + + + S
Sbjct: 653 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 711
Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
EEQAK E R++ ++ +I + E + IC+
Sbjct: 712 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 747
>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2257
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
C F +PG KM W W P ++ + ++ + P + + + + S
Sbjct: 625 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 683
Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
EEQAK E R++ ++ +I + E + IC+
Sbjct: 684 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 719
>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
catalytic polypeptide protein.
Length = 2286
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
C F +PG KM W W P ++ + ++ + P + + + + S
Sbjct: 654 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 712
Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
EEQAK E R++ ++ +I + E + IC+
Sbjct: 713 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 748
>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
epsilon protein.
Length = 2265
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
C F +PG KM W W P ++ + ++ + P + + + + S
Sbjct: 633 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 691
Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
EEQAK E R++ ++ +I + E + IC+
Sbjct: 692 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 727
>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform c protein.
Length = 2243
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
C F +PG KM W W P ++ + ++ + P + + + + S
Sbjct: 611 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 669
Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
EEQAK E R++ ++ +I + E + IC+
Sbjct: 670 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 705
>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform b protein.
Length = 2286
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
C F +PG KM W W P ++ + ++ + P + + + + S
Sbjct: 654 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 712
Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
EEQAK E R++ ++ +I + E + IC+
Sbjct: 713 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 748
>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform a protein.
Length = 2297
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
C F +PG KM W W P ++ + ++ + P + + + + S
Sbjct: 665 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 723
Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
EEQAK E R++ ++ +I + E + IC+
Sbjct: 724 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 759
>AB209902-1|BAD93139.1| 983|Homo sapiens DNA polymerase epsilon
catalytic subunit variant protein.
Length = 983
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 247 CMFLRPGLPVPAKMGWLWNAADTPGAKVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 426
C F +PG KM W W P ++ + ++ + P + + + + S
Sbjct: 462 CDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPA-RAFHELSR 520
Query: 427 EEQAKVEARKMVKLKKQRDAEIR-KALAEAVEDICK 531
EEQAK E R++ ++ +I + E + IC+
Sbjct: 521 EEQAKYEKRRLADYCRKAYKKIHITKVEERLTTICQ 556
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,234,537
Number of Sequences: 237096
Number of extensions: 2231543
Number of successful extensions: 6138
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6133
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -