Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26p04
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003281-1|AAO25038.1|  268|Drosophila melanogaster LD01705p pro...    89   7e-18
AE014134-1788|AAF52879.1|  256|Drosophila melanogaster CG4912-PB...    89   7e-18
AE014134-1789|AAF52880.1|  229|Drosophila melanogaster CG4912-PA...    51   1e-06
AL031863-3|CAA21314.1|  222|Drosophila melanogaster EG:EG0003.7 ...    46   5e-05
AF172636-1|AAD46929.2|  244|Drosophila melanogaster LD24492p pro...    46   5e-05
AE013599-2364|AAF57941.2|  261|Drosophila melanogaster CG6341-PA...    46   5e-05
BT029931-1|ABM92805.1|  750|Drosophila melanogaster IP11737p pro...    30   3.6  
BT025916-1|ABG02160.1|  308|Drosophila melanogaster IP09541p pro...    30   3.6  
AJ849544-1|CAH61079.2| 1740|Drosophila melanogaster CAST protein.      30   3.6  
AE013599-872|AAF58930.3| 1740|Drosophila melanogaster CG34146-PA...    30   3.6  
X51652-1|CAA35964.1|  782|Drosophila melanogaster Bic-D protein ...    29   4.7  
M31684-1|AAA28393.1|  782|Drosophila melanogaster protein ( D.me...    29   4.7  
AY069452-1|AAL39597.1|  782|Drosophila melanogaster LD17129p pro...    29   4.7  
AE014134-2851|AAF53616.1|  782|Drosophila melanogaster CG6605-PA...    29   4.7  

>BT003281-1|AAO25038.1|  268|Drosophila melanogaster LD01705p
           protein.
          Length = 268

 Score = 88.6 bits (210), Expect = 7e-18
 Identities = 65/179 (36%), Positives = 84/179 (46%)
 Frame = +2

Query: 173 EKVWLDRNVYNDAEKAYYESLSKVQXXXXXXXXXXXXEVAKARQHIKNSLECMDSVATLA 352
           +K W D++ Y+ AEK +YE   KV             E+AKAR+HI+NSLE +D V TL 
Sbjct: 19  DKFWADKSRYDLAEKRFYEGPQKVTDRSHYSPLVS--EIAKAREHIQNSLEKIDGV-TLD 75

Query: 353 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLEXXXXXXXXXXXXEKPAA 532
              N+EL+ ++  LE E+K+LK  +  L  L   L   V+ LE             +  A
Sbjct: 76  DGLNSELAKRLAQLEGEHKELKTQVSLLNEL---LTATVKRLETQLKLTNGVSKEPEVEA 132

Query: 533 ASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAYNAKKAKKPVLIAKSNIILDVKP 709
                                           RLAAY AKKAKK  +IAKSNIILDVKP
Sbjct: 133 KKPEANDDDDDVDLFGSDSEEEDGEAARIREERLAAYAAKKAKKVQIIAKSNIILDVKP 191


>AE014134-1788|AAF52879.1|  256|Drosophila melanogaster CG4912-PB,
           isoform B protein.
          Length = 256

 Score = 88.6 bits (210), Expect = 7e-18
 Identities = 65/179 (36%), Positives = 84/179 (46%)
 Frame = +2

Query: 173 EKVWLDRNVYNDAEKAYYESLSKVQXXXXXXXXXXXXEVAKARQHIKNSLECMDSVATLA 352
           +K W D++ Y+ AEK +YE   KV             E+AKAR+HI+NSLE +D V TL 
Sbjct: 7   DKFWADKSRYDLAEKRFYEGPQKVTDRSHYSPLVS--EIAKAREHIQNSLEKIDGV-TLD 63

Query: 353 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLEXXXXXXXXXXXXEKPAA 532
              N+EL+ ++  LE E+K+LK  +  L  L   L   V+ LE             +  A
Sbjct: 64  DGLNSELAKRLAQLEGEHKELKTQVSLLNEL---LTATVKRLETQLKLTNGVSKEPEVEA 120

Query: 533 ASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAYNAKKAKKPVLIAKSNIILDVKP 709
                                           RLAAY AKKAKK  +IAKSNIILDVKP
Sbjct: 121 KKPEANDDDDDVDLFGSDSEEEDGEAARIREERLAAYAAKKAKKVQIIAKSNIILDVKP 179


>AE014134-1789|AAF52880.1|  229|Drosophila melanogaster CG4912-PA,
           isoform A protein.
          Length = 229

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 39/116 (33%), Positives = 50/116 (43%)
 Frame = +2

Query: 362 NTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLEXXXXXXXXXXXXEKPAAAST 541
           N+EL+ ++  LE E+K+LK  +  L  L+ +   R+ET              E   A   
Sbjct: 40  NSELAKRLAQLEGEHKELKTQVSLLNELLTATVKRLETQLKLTNGVSKEPEVE---AKKP 96

Query: 542 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAYNAKKAKKPVLIAKSNIILDVKP 709
                                        RLAAY AKKAKK  +IAKSNIILDVKP
Sbjct: 97  EANDDDDDVDLFGSDSEEEDGEAARIREERLAAYAAKKAKKVQIIAKSNIILDVKP 152


>AL031863-3|CAA21314.1|  222|Drosophila melanogaster EG:EG0003.7
           protein.
          Length = 222

 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 20/27 (74%), Positives = 25/27 (92%)
 Frame = +2

Query: 629 RLAAYNAKKAKKPVLIAKSNIILDVKP 709
           R+AAY AKK+KKP LIAKS+++LDVKP
Sbjct: 119 RVAAYAAKKSKKPALIAKSSVLLDVKP 145


>AF172636-1|AAD46929.2|  244|Drosophila melanogaster LD24492p
           protein.
          Length = 244

 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 20/27 (74%), Positives = 25/27 (92%)
 Frame = +2

Query: 629 RLAAYNAKKAKKPVLIAKSNIILDVKP 709
           R+AAY AKK+KKP LIAKS+++LDVKP
Sbjct: 141 RVAAYAAKKSKKPALIAKSSVLLDVKP 167


>AE013599-2364|AAF57941.2|  261|Drosophila melanogaster CG6341-PA
           protein.
          Length = 261

 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 20/27 (74%), Positives = 25/27 (92%)
 Frame = +2

Query: 629 RLAAYNAKKAKKPVLIAKSNIILDVKP 709
           R+AAY AKK+KKP LIAKS+++LDVKP
Sbjct: 158 RVAAYAAKKSKKPALIAKSSVLLDVKP 184


>BT029931-1|ABM92805.1|  750|Drosophila melanogaster IP11737p
           protein.
          Length = 750

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 359 PNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 475
           PN E+  ++ ++  EN  L++ I  LR  +  L+ RVET
Sbjct: 203 PNLEMQQQMEAIYAENDHLQREISILRETIKDLECRVET 241


>BT025916-1|ABG02160.1|  308|Drosophila melanogaster IP09541p
           protein.
          Length = 308

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 359 PNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 475
           PN E+  ++ ++  EN  L++ I  LR  +  L+ RVET
Sbjct: 203 PNLEMQQQMEAIYAENDHLQREISILRETIKDLECRVET 241


>AJ849544-1|CAH61079.2| 1740|Drosophila melanogaster CAST protein.
          Length = 1740

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 359 PNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 475
           PN E+  ++ ++  EN  L++ I  LR  V  L+ RVET
Sbjct: 203 PNLEMRQQMEAIYAENDHLQREISILRETVKDLECRVET 241


>AE013599-872|AAF58930.3| 1740|Drosophila melanogaster CG34146-PA
           protein.
          Length = 1740

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 359 PNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 475
           PN E+  ++ ++  EN  L++ I  LR  +  L+ RVET
Sbjct: 203 PNLEMQQQMEAIYAENDHLQREISILRETIKDLECRVET 241


>X51652-1|CAA35964.1|  782|Drosophila melanogaster Bic-D protein
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 311 KNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRN 442
           K  +E  D++   +    T L+ ++  LENE K L+  ++ +RN
Sbjct: 90  KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRN 133


>M31684-1|AAA28393.1|  782|Drosophila melanogaster protein (
           D.melanogaster cytoskeleton-like bicaudalD protein
           (BicD) mRNA, complete cds. ).
          Length = 782

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 311 KNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRN 442
           K  +E  D++   +    T L+ ++  LENE K L+  ++ +RN
Sbjct: 90  KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRN 133


>AY069452-1|AAL39597.1|  782|Drosophila melanogaster LD17129p
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 311 KNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRN 442
           K  +E  D++   +    T L+ ++  LENE K L+  ++ +RN
Sbjct: 90  KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRN 133


>AE014134-2851|AAF53616.1|  782|Drosophila melanogaster CG6605-PA
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 311 KNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRN 442
           K  +E  D++   +    T L+ ++  LENE K L+  ++ +RN
Sbjct: 90  KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRN 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,440,834
Number of Sequences: 53049
Number of extensions: 404932
Number of successful extensions: 945
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)