Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26p04
         (710 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    49   4e-06
L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AF016451-12|AAB65994.1|  317|Caenorhabditis elegans Hypothetical...    28   5.7  
AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical...    28   5.7  
Z70718-11|CAA94680.1|  590|Caenorhabditis elegans Hypothetical p...    28   7.6  
Z68301-10|CAA92629.1|  590|Caenorhabditis elegans Hypothetical p...    28   7.6  

>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 40/116 (34%), Positives = 48/116 (41%)
 Frame = +2

Query: 362 NTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLEXXXXXXXXXXXXEKPAAAST 541
           N E    V  L  E+  L K +DDL +LV  LQ+++ TL               PAAA  
Sbjct: 72  NKEGGEDVSKLREEHSALAKKVDDLASLVAELQLQLSTLRQGQTSSVAAPAAA-PAAAKE 130

Query: 542 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAYNAKKAKKPVLIAKSNIILDVKP 709
                                        RLAAY AKKA K   IAKS++ILDVKP
Sbjct: 131 EAAGDDDFDLFGSEDEEEDEEKKKVVEE-RLAAYAAKKATKAGPIAKSSVILDVKP 185


>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +2

Query: 629 RLAAYNAKKAKKPVLIAKSNIILDVKP 709
           RLAAY  KKAKK   IAKS++ILDVKP
Sbjct: 109 RLAAYAEKKAKKAGPIAKSSVILDVKP 135


>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
           protein C08H9.2 protein.
          Length = 1220

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = +2

Query: 356 VPNTELSTKVISLENENKDLKKAIDDLRNLVISLQ 460
           +PN E ++  I +E + + +KKA+ ++R +V  ++
Sbjct: 454 IPNEETNSDEIVVEGKKEGVKKAVTEIRAIVTKIE 488


>AF016451-12|AAB65994.1|  317|Caenorhabditis elegans Hypothetical
           protein C03A7.13 protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/29 (34%), Positives = 21/29 (72%)
 Frame = -3

Query: 132 FELYLNTIKTLVHTIKLNFYVNKVNRANL 46
           F L+L+ + TLV+T  + F++N + +++L
Sbjct: 8   FILFLSLVSTLVNTSNVVFFINAIGKSHL 36


>AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical
           protein Y73E7A.8 protein.
          Length = 707

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/45 (22%), Positives = 26/45 (57%)
 Frame = +2

Query: 341 ATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 475
           A + G+  + +  + + ++ +  +L   I+DLR+L+  +  R+E+
Sbjct: 635 ARIFGIKTSSIPEETLKIQTKKSELTDEINDLRDLMEQMDERIES 679


>Z70718-11|CAA94680.1|  590|Caenorhabditis elegans Hypothetical
           protein W01B6.9 protein.
          Length = 590

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/65 (24%), Positives = 35/65 (53%)
 Frame = +2

Query: 284 EVAKARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQV 463
           ++ KA+ +++ +L     +     +  +E   K+    +EN+ ++K +DDL+N  I LQ 
Sbjct: 285 DIRKAKDYLEQNLHVKQHMEKELAMVKSEQEEKI----SENEKVQKMVDDLKN-KIELQK 339

Query: 464 RVETL 478
           ++  L
Sbjct: 340 QIHGL 344


>Z68301-10|CAA92629.1|  590|Caenorhabditis elegans Hypothetical
           protein W01B6.9 protein.
          Length = 590

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/65 (24%), Positives = 35/65 (53%)
 Frame = +2

Query: 284 EVAKARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQV 463
           ++ KA+ +++ +L     +     +  +E   K+    +EN+ ++K +DDL+N  I LQ 
Sbjct: 285 DIRKAKDYLEQNLHVKQHMEKELAMVKSEQEEKI----SENEKVQKMVDDLKN-KIELQK 339

Query: 464 RVETL 478
           ++  L
Sbjct: 340 QIHGL 344


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,345,101
Number of Sequences: 27780
Number of extensions: 217486
Number of successful extensions: 566
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)