Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26p01
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 42 1e-04
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 40 3e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 3e-04
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 38 0.001
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 38 0.002
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 35 0.013
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 35 0.013
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 33 0.030
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 33 0.039
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 31 0.12
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 31 0.12
SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyc... 31 0.16
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 31 0.21
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 30 0.37
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 30 0.37
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 29 0.48
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.64
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 29 0.85
SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|c... 28 1.1
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 28 1.5
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 27 2.0
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 27 3.4
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 6.0
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 26 6.0
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 26 6.0
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 25 7.9
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +1
Query: 466 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQ 645
P++ LAG+FSG + P+D +KTR+Q N ++ +V+G I +I I +
Sbjct: 18 PMYAHLLAGAFSGILEHSVMYPVDAIKTRMQMLNG--VSRSVSGNIVNSVIKISST---- 71
Query: 646 EQIVGLWRGM 675
E + LWRG+
Sbjct: 72 EGVYSLWRGI 81
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 484 LAGSFSGTFSTVLFQPLDLVKTRLQ 558
++G SG ++ L PLD+VKT LQ
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQ 233
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 484 LAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAA 585
LAG+ + T S P D++K R+Q P+ +A
Sbjct: 118 LAGACAITISDAFMTPFDVIKQRMQLPSRKYKSA 151
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 40.3 bits (90), Expect = 3e-04
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Frame = +1
Query: 433 DLDKPTDNEYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPN-------HHVMAATV 591
DL + + P+ K L+ +T+ PLD+VKTRLQ+ + + +A +
Sbjct: 13 DLSVNAEPDVKPIAK-MLSACVGSVITTLTVTPLDVVKTRLQSESISQYSSTQPISSAKI 71
Query: 592 NGRIQP------GMITIFANIIRQEQIVGLWRGMIPSV 687
G+ +P G ++ I R E + LWRG++PS+
Sbjct: 72 LGKGRPAPKPLGGPVSGLYQIARHEGVRSLWRGLVPSL 109
Score = 32.3 bits (70), Expect = 0.069
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 481 FLAGSFSGTFSTVLFQPLDLVKTRLQNPNH 570
F++G SGT +T+L QP D+ KT Q H
Sbjct: 250 FVSGGISGTLATLLTQPFDVSKTAKQVHGH 279
Score = 30.7 bits (66), Expect = 0.21
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +1
Query: 478 AFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQIV 657
A +AG+ + T S + P++L +TR+Q H I + +I Q+ I+
Sbjct: 139 AAIAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAR-EIANEVFDGLKLMIHQKGIL 197
Query: 658 GLWRGMIPSVARCV 699
LW G+ ++ R V
Sbjct: 198 NLWSGVSVTLWRDV 211
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 39.9 bits (89), Expect = 3e-04
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +1
Query: 445 PTDNEYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITI 624
P + + +AG+ G F T L P D++K+R+Q P ++T
Sbjct: 191 PASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVT- 249
Query: 625 FANIIRQEQIVGLWRGMIPSVAR 693
+ R+E L++G +P V R
Sbjct: 250 ---VAREEGFTALYKGFVPKVLR 269
Score = 34.3 bits (75), Expect = 0.017
Identities = 25/81 (30%), Positives = 37/81 (45%)
Frame = +1
Query: 445 PTDNEYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITI 624
P DN PV F AG+ +G + PLD+VKTR+Q +V G
Sbjct: 2 PHDNIPFPV--TFAAGAVAGISEVLTLYPLDVVKTRMQ--------LSVGKSDYNGTFDC 51
Query: 625 FANIIRQEQIVGLWRGMIPSV 687
I++ E L+RG++P +
Sbjct: 52 LKKIVKNEGPHRLYRGILPPI 72
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 38.3 bits (85), Expect = 0.001
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 475 KAFLAGSFSGTFSTVLFQPLDLVKTRLQ-NPNHHVMAATVNGRIQPGMITIFANIIRQEQ 651
K +AG +G S+++ PLD+VKTR Q + N + G ++ I E
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66
Query: 652 IVGLWRGMIP 681
I GL+RG+ P
Sbjct: 67 IAGLYRGVGP 76
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +1
Query: 475 KAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQI 654
K AG+ G S+ QPLDL+KTR Q + V RI I+ + +
Sbjct: 16 KHLAAGALGGFISSTTLQPLDLLKTRCQQSQRDSLPKMVR-RI----------ILHEGGV 64
Query: 655 VGLWRGMIPSVAR 693
LW+G +PS+ R
Sbjct: 65 FSLWKGTLPSILR 77
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 484 LAGSFSGTFSTVLFQPLDLVKTRLQNPNH 570
++G SG +T + P D++KTR+Q H
Sbjct: 215 MSGLISGATATAITNPFDMLKTRVQLEPH 243
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 34.7 bits (76), Expect = 0.013
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +1
Query: 445 PTDNEYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITI 624
P D + V FL GS +G + QP+D VK+R+Q+ ++A+ + I
Sbjct: 196 PPDEKLSTV-TTFLVGSVAGIITVYCTQPIDTVKSRMQS-----LSAS---KEYKNSIHC 246
Query: 625 FANIIRQEQIVGLWRGMIPSVARCV 699
I+ Q+ ++ W G P +AR +
Sbjct: 247 AYKILTQDGLLRFWSGATPRLARLI 271
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 448 TDNEYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 558
+ N+ PV K+ +AG +G + P + KTRLQ
Sbjct: 11 SSNKPGPV-KSIIAGGVAGAIEISITYPAEFAKTRLQ 46
Score = 25.8 bits (54), Expect = 6.0
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 475 KAFLAGSFSGTFSTVL-FQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQ 651
+ LAG +G +VL P + +KT + + + G +Q I + N IR
Sbjct: 105 RTVLAGLGAGVAESVLVLTPFESIKTAIIDDRKRPNPR-LKGFLQASRIIVHENGIR--- 160
Query: 652 IVGLWRGMIPSVAR 693
GL+RG+ +VAR
Sbjct: 161 --GLYRGLAATVAR 172
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 34.7 bits (76), Expect = 0.013
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 490 GSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQIVGLWR 669
G+ SG+ + PL++++TRLQ AT + G I F + E GL++
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPATYD-----GFIDCFYKTTKNEGFRGLYK 396
Query: 670 GMIPSVAR 693
G+ P++ +
Sbjct: 397 GLSPNLLK 404
Score = 29.1 bits (62), Expect = 0.64
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 448 TDNEYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 558
+ +E H ++LAG +G+ + + P+D +K R+Q
Sbjct: 221 SSSENHSPLYSYLAGGMAGSVAQMFIYPVDTLKFRIQ 257
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 33.5 bits (73), Expect = 0.030
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 487 AGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQ-PGMITIFANIIRQEQIVGL 663
+G +G S + LD +TRL N +A G Q G++ ++ R + + GL
Sbjct: 138 SGGAAGAASLLFVYSLDYARTRLAND---AKSAKKGGERQFNGLVDVYRKTYRSDGLRGL 194
Query: 664 WRGMIPSVARCV 699
+RG PSV V
Sbjct: 195 YRGFGPSVVGIV 206
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 33.1 bits (72), Expect = 0.039
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 466 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQN 561
P F+AG +G + PLD+VKTRLQ+
Sbjct: 47 PPLSHFIAGGVAGMLGAIATAPLDVVKTRLQS 78
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 484 LAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQIVGL 663
+A + +G ++ P+ LVKTRLQ AA I IR E GL
Sbjct: 167 MAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQYRSSID-----CIIKTIRLEGFRGL 221
Query: 664 WRGMIPSV 687
++G+ S+
Sbjct: 222 YKGLSASL 229
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 31.5 bits (68), Expect = 0.12
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 469 VFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 558
VF+ + GS +G + L PLD+ KTRLQ
Sbjct: 214 VFRELITGSLAGAGAGFLTTPLDVAKTRLQ 243
Score = 28.7 bits (61), Expect = 0.85
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 484 LAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQIV-G 660
+AG G + L LD VKTR Q AA + GM+ ++ I+ +E + G
Sbjct: 20 IAGGIGGATADFLMHSLDTVKTRQQ-------AALYTNKYN-GMVKCYSTILCEEGVFHG 71
Query: 661 LWRGMIP 681
L+ G+ P
Sbjct: 72 LYSGVCP 78
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 484 LAGSFSGTFSTVLFQPLDLVKTRLQ 558
LAG F++V++ P +++KTRLQ
Sbjct: 115 LAGFVGDLFASVVYVPSEVLKTRLQ 139
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 31.5 bits (68), Expect = 0.12
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 451 DNEYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRL 555
D E+ + FL+GS +GT S PL+L++ RL
Sbjct: 110 DPEHETHARRFLSGSLAGTCSVFFTYPLELIRVRL 144
>SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 300
Score = 31.1 bits (67), Expect = 0.16
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +1
Query: 472 FKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQ 651
F+ F + S ++ PLD++KTR+QN N Q G TI N+++ E
Sbjct: 212 FQNFFTSIAGASASLIVSAPLDVIKTRIQNKNF--------DNPQSG-FTILKNMLKFEG 262
Query: 652 IVGLWRGMIPSV 687
++G+ P +
Sbjct: 263 PTSFFKGLTPKL 274
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 30.7 bits (66), Expect = 0.21
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 529 PLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQIVGLWRGMIPSV 687
PLDL+K R Q VN I PG I F I+ +E + GL+ G +P++
Sbjct: 43 PLDLIKCRKQ----------VNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTL 85
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 29.9 bits (64), Expect = 0.37
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +1
Query: 475 KAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQI 654
+A ++GS +G + L P D+VKTR+ + + +I+ E
Sbjct: 260 EAAISGSIAGGIAAALTTPFDVVKTRIMTSQQRL-----------SYVFTIKSIVAHEGF 308
Query: 655 VGLWRGMIPSV 687
+ L++G++P V
Sbjct: 309 LALYKGIVPRV 319
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 29.9 bits (64), Expect = 0.37
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 475 KAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNH 570
K FLAG G ++ QP D VK RLQ+ ++
Sbjct: 19 KDFLAGVSGGVAQVLVGQPFDCVKVRLQSQSN 50
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 484 LAGSFSGTFSTVLFQPLDLVKTRLQ 558
+AG +GT ST++ PLDL K ++Q
Sbjct: 5 IAGLAAGTASTLIMHPLDLAKIQMQ 29
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.64
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 466 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQ 645
PV+ LAG S + P D++K R+Q ++P +F +++
Sbjct: 15 PVWHYTLAGGISSVICRFMIAPFDVIKIRMQ---------ITQSSLRP----VFKETVQK 61
Query: 646 EQIVGLWRGMI 678
E + LWRG +
Sbjct: 62 EGVRALWRGNV 72
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 481 FLAGSFSGTFSTVLFQPLDLVKTRLQN--PNHHVMAATVNGRIQPGMITIFANI 636
FL G+ +G F+T+ PLD ++T+ + H++ AT + G+ F +
Sbjct: 108 FLCGTSAGIFATLTSYPLDTMRTKFASYAKTPHMLPATKKIYAEAGIKGFFPGL 161
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 28.7 bits (61), Expect = 0.85
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +1
Query: 481 FLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQIVG 660
F A S S V+ PLD +K R Q N P + + F N ++ E + G
Sbjct: 21 FSAALVSSAISNVIGYPLDSIKVRQQTYNF------------PTIRSCFQNAVKNEGLKG 68
Query: 661 LWRGM 675
L+RG+
Sbjct: 69 LYRGL 73
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 454 NEYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 558
N+ P F +G+F G S +L P+D K+ +Q
Sbjct: 209 NDVKPHFAYAFSGAFCGALSWILVFPVDTAKSIVQ 243
>SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 484 LAGSFSGT-FSTVLFQPLDLVKTRLQNPNHHVMAATV 591
L GS S + + ++ PLDL+K+ L + NHH + A V
Sbjct: 306 LVGSASKSIYGENIWNPLDLLKSFLDHSNHHGVRAGV 342
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 487 AGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQIVGLW 666
+G+ SG + P LVKTR+Q+ + G + F+ II++ + GL+
Sbjct: 134 SGAGSGLCGALFGSPFFLVKTRMQSYSPKFPVGQQYG--YKHIFNAFSRIIKENGVKGLF 191
Query: 667 RGMIPSVARCV 699
G ++ R V
Sbjct: 192 VGADAAILRTV 202
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +2
Query: 335 EFFYLIFAYFEK*CRNLWKRFRMDGRQIQRRPLTSTSRQIMNIIRCSKRFL 487
E Y+ +EK RNL K R D Q PL S ++ N I R L
Sbjct: 21 ETIYIDLLNYEKQLRNLNKNTREDSLQTNLNPLLSLIKKYGNFIAYPTRKL 71
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 26.6 bits (56), Expect = 3.4
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 481 FLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNGRIQPGMITIFANIIRQEQIVG 660
F+A +G S QPL++ + +Q+ + ++ PG++ +I + I G
Sbjct: 209 FVASVSAGALSC-WNQPLEVARVEMQSLTKGIQHSS------PGIMQTIMSIYKNNGIKG 261
Query: 661 LWRGMIP 681
L+RG +P
Sbjct: 262 LYRGAVP 268
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 214 FLNIGTVILSL*SNMLQC 267
FLNIGT++++ N+L+C
Sbjct: 206 FLNIGTIVVTFQLNVLRC 223
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 195 NRDMISFSKHWHSNFIFVIKHASVLL 272
N+D+++ + W NF+ V K SV L
Sbjct: 305 NQDLLNSVRIWSENFLIVSKEKSVAL 330
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 25.8 bits (54), Expect = 6.0
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = -2
Query: 563 GFCKRVFTKSNGWKSTVLNVPENEPARNALNTG*YSLSVGLSRSTGAVVSVAHPFESASK 384
G+ + T S +ST L N+P N L + VGL+ + V + P+ S S
Sbjct: 1007 GYARFDGTMSQQMRSTALETFRNDPDVNVLIISLKAGGVGLNLTCANHVFIMDPWWSWSV 1066
Query: 383 DCDIIFQNMRKLNRKIQYIKYYV 315
+ I + R K ++ Y+
Sbjct: 1067 EAQAIDRIHRLGQEKPVFVTRYI 1089
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 496 FSGTFSTVLFQPLDLVKTRLQN-PNHHVMAATVNGRIQPGMITIFANIIRQEQIVGLWRG 672
F T S +L DLV ++ P+ +++A N I P I Q+ G W
Sbjct: 142 FPRTQSEILASNEDLVNKMIEAFPDVPIVSAIGNNDIYPHNIMEAGPSSMTRQLAGAWDA 201
Query: 673 MIP 681
+IP
Sbjct: 202 LIP 204
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,969,217
Number of Sequences: 5004
Number of extensions: 61212
Number of successful extensions: 203
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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