Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26o18
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U00043-11|AAN65290.1|  641|Caenorhabditis elegans Hypothetical p...    29   3.4  
U00043-10|AAC77505.1|  779|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z98853-5|CAB57903.1|  290|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical
           protein C05D9.3 protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 168 ICHVSGHLQCNKAICDE 118
           +CH +GHL C + +CD+
Sbjct: 229 LCHQNGHLVCGQCVCDQ 245


>U00043-11|AAN65290.1|  641|Caenorhabditis elegans Hypothetical
           protein T26A5.2b protein.
          Length = 641

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 490 LLHFKLYIPHHVVISSARPLFQNVIRLLTNVHK 392
           L HFKL   HHV+I SA      V+ +++ V K
Sbjct: 145 LQHFKLLTGHHVIIQSATSDRDTVLAVVSRVMK 177


>U00043-10|AAC77505.1|  779|Caenorhabditis elegans Hypothetical
           protein T26A5.2a protein.
          Length = 779

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 490 LLHFKLYIPHHVVISSARPLFQNVIRLLTNVHK 392
           L HFKL   HHV+I SA      V+ +++ V K
Sbjct: 283 LQHFKLLTGHHVIIQSATSDRDTVLAVVSRVMK 315


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
           protein F40E10.4 protein.
          Length = 1410

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 338 LSVETVSACDKKSIIDLIFMNISK*SNNILKKRPR*TDDDVMWYV*FEMQQNL 496
           LS+ ++   D KSI ++ F N++  S   L K P   D ++ W     +Q+N+
Sbjct: 385 LSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPLICDCNLQWLAQINLQKNI 437


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
           protein F40E10.4 protein.
          Length = 1410

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 338 LSVETVSACDKKSIIDLIFMNISK*SNNILKKRPR*TDDDVMWYV*FEMQQNL 496
           LS+ ++   D KSI ++ F N++  S   L K P   D ++ W     +Q+N+
Sbjct: 385 LSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPLICDCNLQWLAQINLQKNI 437


>Z98853-5|CAB57903.1|  290|Caenorhabditis elegans Hypothetical
           protein R08A2.5 protein.
          Length = 290

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -3

Query: 465 HIT-SSSVQRGLFFKMLLDYLLMFINIKSIMLFLSQADTVSTDKKYVIWFRRN 310
           H++ +SS Q  L    ++D   + +      L LSQ DT+ T  +  +   RN
Sbjct: 176 HVSRASSTQLTLHLASIIDIPFLVVQASPTFLILSQTDTIPTSCESFLVLERN 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,618,874
Number of Sequences: 27780
Number of extensions: 353503
Number of successful extensions: 770
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)