Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26o10
         (377 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41264-11|AAA82431.2|  550|Caenorhabditis elegans Hypothetical p...    33   0.090
Z81568-1|CAB04594.1|  681|Caenorhabditis elegans Hypothetical pr...    29   0.83 
U41009-5|AAO44915.1|  173|Caenorhabditis elegans Hypothetical pr...    28   2.5  
U50311-5|AAX22295.1|  299|Caenorhabditis elegans Serpentine rece...    27   5.9  
Z83232-4|CAB05756.2|  891|Caenorhabditis elegans Hypothetical pr...    26   7.8  
U58742-5|AAB36859.3|  711|Caenorhabditis elegans Hypothetical pr...    26   7.8  
U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    26   7.8  

>U41264-11|AAA82431.2|  550|Caenorhabditis elegans Hypothetical
           protein F10E7.1 protein.
          Length = 550

 Score = 32.7 bits (71), Expect = 0.090
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = -1

Query: 317 FPTANLVFSELSPFSPSLDVQSACRNLLSFSMY*LPTPSL*DRILYILLSREFLTPFRPG 138
           FPT N++ +  + FSP L V+  CR ++ F     P       + + L   E +    PG
Sbjct: 397 FPTKNMIITLPNSFSP-LPVEHHCRFVMMFLRMGFPKGQRNFNVTWRLFIHEPIYGTSPG 455

Query: 137 FSYR 126
           F YR
Sbjct: 456 FKYR 459


>Z81568-1|CAB04594.1|  681|Caenorhabditis elegans Hypothetical
           protein K08E3.1 protein.
          Length = 681

 Score = 29.5 bits (63), Expect = 0.83
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +2

Query: 143 DGMVLKTLWTKVY---TGYDPKVKELAINTLRKTGDYDKL 253
           +G+VL   W K Y   T  + +    A+NTL++ G+YD+L
Sbjct: 152 NGVVLNMSWRKEYRMMTEDERRRWHNALNTLKRNGEYDRL 191


>U41009-5|AAO44915.1|  173|Caenorhabditis elegans Hypothetical
           protein C06E7.1d protein.
          Length = 173

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 9/25 (36%), Positives = 19/25 (76%)
 Frame = +2

Query: 152 VLKTLWTKVYTGYDPKVKELAINTL 226
           +L++ WT++ T  +P++KEL ++ L
Sbjct: 140 LLESTWTRIVTMSEPEIKELCLDML 164


>U50311-5|AAX22295.1|  299|Caenorhabditis elegans Serpentine
           receptor, class sx protein34, isoform c protein.
          Length = 299

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 201 TLGSYPVYTFVQRVFNTIPSRVFLSY 124
           +L SY +YTF+Q VF  I + +FL +
Sbjct: 114 SLVSYSLYTFLQLVFPFIYTSIFLLF 139


>Z83232-4|CAB05756.2|  891|Caenorhabditis elegans Hypothetical
           protein K04B12.3 protein.
          Length = 891

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = -2

Query: 229 SQCINCQLLHFRIVSC---IYFCPESF*HHSVQGFLIVRKSIDQSKIH*DKSQQNDINFT 59
           S+C   ++LHF  +SC   I F   S     +  FL   K ++ ++I   K     +  +
Sbjct: 105 SECQQIRMLHFLFISCHFIIIFEQTSRIDLELMRFL---KKVNSARIQLRKKINQRLVAS 161

Query: 58  DHFHIFYNTSVLSTSE 11
           D   + +N  +LS++E
Sbjct: 162 DLRDVSFNNRILSSAE 177


>U58742-5|AAB36859.3|  711|Caenorhabditis elegans Hypothetical
           protein F31A3.5 protein.
          Length = 711

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 107 LVNALTYDKKTLDGMVLKTLWTKVYTGYDPKVKE 208
           L N LT+++++  G  L  L   +YT  D K K+
Sbjct: 100 LQNMLTFNRQSAPGRALPKLPADLYTAIDKKSKQ 133


>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 22  SALTYCKI-YENGP*SLYHSVDFYPNGSCFG 111
           S  + CK+  E G     HS++F+P+G  FG
Sbjct: 324 SGKSLCKVSVEPGSQIAVHSIEFHPDGLIFG 354


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,713,511
Number of Sequences: 27780
Number of extensions: 140887
Number of successful extensions: 380
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)