Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26o08
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 276  CCGFNGQWPQLTAH 317
            C  ++GQW ++T H
Sbjct: 2014 CYDYHGQWDKITGH 2027


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 5/24 (20%), Positives = 16/24 (66%)
 Frame = +1

Query: 55  KMYFHSFNSIIFLYNNINNHLFCT 126
           ++YF + +   F++  ++++ FC+
Sbjct: 326 RLYFSNLDKDAFIHRTVDDYFFCS 349


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 300 PQLTAHQYDLTQIWLICWTCGVLNT 374
           P++T+   ++ + W IC+T GV+ T
Sbjct: 28  PKITSTNNEVPR-WYICYTIGVIIT 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,983
Number of Sequences: 336
Number of extensions: 3983
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)