Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26o08
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_38543| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.0
SB_41471| Best HMM Match : Cupin_4 (HMM E-Value=0.31) 28 7.0
SB_5144| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 28 7.0
SB_28618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_27392| Best HMM Match : Kazal_1 (HMM E-Value=0.00072) 28 9.2
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 28 9.2
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 233 YLNKNPHKIMCNVILLRVQWSVAPAHCASIRSDPDLANMLDLWRIKYKTKDDRFLELKVK 412
+L+ PH +C L+ QW + HC + DP+ ++ L + T + V+
Sbjct: 78 WLHVTPHGFVCGGSLIAPQWVLTAGHCI-LTEDPEKYRVV-LGDVDRDTTEGSEQIFHVR 135
Query: 413 KSIIHWQFNR-IDFQNNIGL 469
+ I H ++R + + N++ L
Sbjct: 136 RIIKHPHYSRDVPYDNDVAL 155
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 31.5 bits (68), Expect = 0.75
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +2
Query: 242 KNPHKIMCNVILLRVQWSVAPAHCASIRSDPDLANMLDLWRIKYKTKDDRFLELKVKKSI 421
K+ +C L+ W V AHC + S+P ++ + + L VKK I
Sbjct: 495 KSRGNFICGGSLVSSTWVVTAAHCVARSSNPAQYQII-VGEHNRNVNEVTEETLNVKKVI 553
Query: 422 IHWQFNRIDFQNNIGL 469
H Q+N N+I L
Sbjct: 554 AHPQYNNPRLSNDIAL 569
>SB_38543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 505 RCNNHQSNFTRRPRSWSRTNVLNKLGCNI 591
RC NHQS T R R W V +LG +
Sbjct: 187 RCANHQSQKTTRRRVWDIKQVREELGAQV 215
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +2
Query: 263 CNVILLRVQWSVAPAHCASIRSDPDLANMLDLWRIKYKTKDDRFLE--LKVKKSIIHWQ- 433
C L+ QW V AHC DP N L + ++K E V + I+H Q
Sbjct: 377 CGGTLVSPQWVVTAAHCVDHVKDPKNYNELAITLGEHKRSASEGTEQRFSVARIIVHPQY 436
Query: 434 FNRIDFQNNIGL 469
F N+I L
Sbjct: 437 FEPTAINNDIAL 448
>SB_41471| Best HMM Match : Cupin_4 (HMM E-Value=0.31)
Length = 406
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 473 LHENVTSIIPYDVTTISPISPDVRDHGHEQMFLIN 577
L + S+ YD TT +SPD+ + ++ +F +N
Sbjct: 42 LSDTTNSMTTYDATTTGTLSPDLMEEVNKALFDLN 76
>SB_5144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1015
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/88 (29%), Positives = 36/88 (40%)
Frame = +2
Query: 167 ITRRTNKESFHRNESYYPIGFIYLNKNPHKIMCNVILLRVQWSVAPAHCASIRSDPDLAN 346
IT K F + E + G I+ NK V V+ S P ++RS +A
Sbjct: 427 ITFNGEKCEFEKQEIEF-FGHIFTNKGLRPAPDKV--RAVKDSERPEDKEAVRSFLGMAG 483
Query: 347 MLDLWRIKYKTKDDRFLELKVKKSIIHW 430
LD + Y TK EL K++ HW
Sbjct: 484 YLDNFISAYATKAAPLFELTRKETKFHW 511
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 260 MCNVILLRVQWSVAPAHCAS---IRSDPDLANMLDLWRIKYKTKDDRFLELKVKKSIIHW 430
+C L+ +W + HC +DPD +L R ++ +K +VK+ I+H
Sbjct: 78 VCAGSLIEARWIITAGHCFKDPRSSADPDKWKVLLGERRRHSSKRHFERAQQVKRIIVHP 137
Query: 431 QFNRIDFQNNIGLFLHENVTSIIPYDV 511
+FN G F++ + I YD+
Sbjct: 138 KFN--------GKFVNGDFAEPIDYDI 156
>SB_28618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 593 NNKSEKRNVTAVYLVTSEKCLDHVSQIIDEKRQYEFCA 706
+N S+ L+T + + HVS I+ E RQ+ CA
Sbjct: 52 SNTSQSEETVLEELITPRR-VRHVSSILQEARQHHLCA 88
>SB_27392| Best HMM Match : Kazal_1 (HMM E-Value=0.00072)
Length = 196
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 407 VKKSIIHWQFNRIDFQNNIGLFLHENVTSII 499
++K + W+F+R+DF N G+ + SII
Sbjct: 117 MRKELAQWEFDRVDF-NRDGVLSGREINSII 146
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2
Query: 263 CNVILLRVQWSVAPAHCASIRSDPDLANMLDLWRIKYKTKDDRFLELKVKKSIIHWQFNR 442
C LL W++ AHC S+P A+ + D L+V + I H +F+
Sbjct: 111 CGASLLSPGWALTAAHCVQRSSNP--ADYTLAAGAHRRVNDAHAQVLRVSQVISHKEFSM 168
Query: 443 IDFQNNIGL 469
+N++ L
Sbjct: 169 GHLRNDVTL 177
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,832,833
Number of Sequences: 59808
Number of extensions: 429738
Number of successful extensions: 914
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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