Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26o06
(754 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118667-1|AAM50527.1| 487|Drosophila melanogaster AT01605p pro... 31 1.7
AE014297-1178|AAF54541.2| 487|Drosophila melanogaster CG14689-P... 31 1.7
AY069549-1|AAL39694.1| 434|Drosophila melanogaster LD27553p pro... 30 2.9
AF017096-1|AAC39085.1| 347|Drosophila melanogaster protein ( Dr... 30 2.9
AE014297-671|AAF54165.2| 434|Drosophila melanogaster CG2678-PA ... 30 2.9
AJ556817-1|CAD89222.1| 1177|Drosophila melanogaster SMG5 protein... 29 6.8
AE014134-2425|AAF53352.1| 1177|Drosophila melanogaster CG8954-PB... 29 6.8
AE014134-2424|AAF53351.1| 1177|Drosophila melanogaster CG8954-PA... 29 6.8
BT030415-1|ABO52835.1| 735|Drosophila melanogaster IP15836p pro... 29 9.0
>AY118667-1|AAM50527.1| 487|Drosophila melanogaster AT01605p
protein.
Length = 487
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 659 KVFRIHPPHSVSVKQSWPWLNRDATLLRXNSG 754
KV+RI+ PHSV + Q WL RD + SG
Sbjct: 384 KVYRIYEPHSVQILQK--WLKRDKLVQFYRSG 413
>AE014297-1178|AAF54541.2| 487|Drosophila melanogaster CG14689-PA
protein.
Length = 487
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 659 KVFRIHPPHSVSVKQSWPWLNRDATLLRXNSG 754
KV+RI+ PHSV + Q WL RD + SG
Sbjct: 384 KVYRIYEPHSVQILQK--WLKRDKLVQFYRSG 413
>AY069549-1|AAL39694.1| 434|Drosophila melanogaster LD27553p
protein.
Length = 434
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 308 QLVCWECLAIMRKFLKFKWQVHNAQEHLKVKGLNQS 415
Q +C C+ ++ +FKWQ + +H + LNQS
Sbjct: 58 QFICVSCVLAVQNAFRFKWQSEQSYQHF-FRVLNQS 92
>AF017096-1|AAC39085.1| 347|Drosophila melanogaster protein (
Drosophila melanogasterprophosphoribosylamidotransferase
(Prat) gene, completecds. ).
Length = 347
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 308 QLVCWECLAIMRKFLKFKWQVHNAQEHLKVKGLNQS 415
Q +C C+ ++ +FKWQ + +H + LNQS
Sbjct: 58 QFICVSCVLAVQNAFRFKWQSEQSYQHF-FRVLNQS 92
>AE014297-671|AAF54165.2| 434|Drosophila melanogaster CG2678-PA
protein.
Length = 434
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 308 QLVCWECLAIMRKFLKFKWQVHNAQEHLKVKGLNQS 415
Q +C C+ ++ +FKWQ + +H + LNQS
Sbjct: 58 QFICVSCVLAVQNAFRFKWQSEQSYQHF-FRVLNQS 92
>AJ556817-1|CAD89222.1| 1177|Drosophila melanogaster SMG5 protein
protein.
Length = 1177
Score = 29.1 bits (62), Expect = 6.8
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = -1
Query: 598 ISGSGLTNILIDSEILASGSISSFLSGKHFNRCRKIHPLLSLALQNLHLERFLQQHDQDF 419
+S L +D I + SIS K++ K++P + +A L + Q HD D
Sbjct: 214 LSLGDLHRYFLDFRIDSKLSISKEQVAKYYLEAFKLNPAIGMAQNQLGTLHYGQNHDLD- 272
Query: 418 L*LVQSFDLQMLLCIVHLPFEFQELSHN 335
L L+CI+ PFE E + N
Sbjct: 273 ---STYHYLYSLVCII--PFELSENNLN 295
>AE014134-2425|AAF53352.1| 1177|Drosophila melanogaster CG8954-PB,
isoform B protein.
Length = 1177
Score = 29.1 bits (62), Expect = 6.8
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = -1
Query: 598 ISGSGLTNILIDSEILASGSISSFLSGKHFNRCRKIHPLLSLALQNLHLERFLQQHDQDF 419
+S L +D I + SIS K++ K++P + +A L + Q HD D
Sbjct: 214 LSLGDLHRYFLDFRIDSKLSISKEQVAKYYLEAFKLNPAIGMAQNQLGTLHYGQNHDLD- 272
Query: 418 L*LVQSFDLQMLLCIVHLPFEFQELSHN 335
L L+CI+ PFE E + N
Sbjct: 273 ---STYHYLYSLVCII--PFELSENNLN 295
>AE014134-2424|AAF53351.1| 1177|Drosophila melanogaster CG8954-PA,
isoform A protein.
Length = 1177
Score = 29.1 bits (62), Expect = 6.8
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = -1
Query: 598 ISGSGLTNILIDSEILASGSISSFLSGKHFNRCRKIHPLLSLALQNLHLERFLQQHDQDF 419
+S L +D I + SIS K++ K++P + +A L + Q HD D
Sbjct: 214 LSLGDLHRYFLDFRIDSKLSISKEQVAKYYLEAFKLNPAIGMAQNQLGTLHYGQNHDLD- 272
Query: 418 L*LVQSFDLQMLLCIVHLPFEFQELSHN 335
L L+CI+ PFE E + N
Sbjct: 273 ---STYHYLYSLVCII--PFELSENNLN 295
>BT030415-1|ABO52835.1| 735|Drosophila melanogaster IP15836p
protein.
Length = 735
Score = 28.7 bits (61), Expect = 9.0
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = -2
Query: 333 AKHSQQTSCSVS*TESPIASPAKSNINKRKI*YTSWVLFKANSLRSPHKHVLQMILKLLS 154
A HS + +C + I A + + Y S L + R PHK+ ++ KL
Sbjct: 661 ATHSGEYTCVAKNPAAEIKYTALLQVKGSVLAYPSQKLNTEHKKRKPHKYRSHLLSKLKL 720
Query: 153 TSCSILI 133
+ CS+ +
Sbjct: 721 SQCSLTL 727
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,984,682
Number of Sequences: 53049
Number of extensions: 663024
Number of successful extensions: 1666
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1666
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -