Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26o06
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-9|CAB05232.2|  260|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81579-6|CAB04652.3|  347|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p...    29   4.7  
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AF039710-10|AAB96693.2|  393|Caenorhabditis elegans Hypothetical...    28   8.2  

>Z82274-9|CAB05232.2|  260|Caenorhabditis elegans Hypothetical
           protein JC8.5 protein.
          Length = 260

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 10/47 (21%), Positives = 28/47 (59%)
 Frame = +3

Query: 495 FLHRLKCFPLKNELIEPLAKISLSIRIFVNPDPLINFPIAFMNDNIM 635
           + ++++CF  + +++ P  ++ L +  +++PD  +N P     D+I+
Sbjct: 177 YFNKIQCFCFEEQILNPGEQVDLPVFFYIDPD-YVNDPALEYLDSIL 222


>Z81579-6|CAB04652.3|  347|Caenorhabditis elegans Hypothetical
           protein R13H4.7 protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 480 SLLLCRIYIWKGFYSSMIRTSCDWFSPLTF 391
           S+++C I  + G   S++    DWF+PL +
Sbjct: 120 SIMICAIPWFTGLLQSLVEHQFDWFTPLFY 149


>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
           protein ZK1251.9 protein.
          Length = 1701

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 314 VCWECLAIMRKFLKFKWQVHNAQEHLKVKGL 406
           VCW+C AI+ + L+F        E+L+  G+
Sbjct: 567 VCWQCEAIVTEMLRFTGSSFREAENLRKLGM 597


>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
           protein ZK1251.9 protein.
          Length = 1701

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 314 VCWECLAIMRKFLKFKWQVHNAQEHLKVKGL 406
           VCW+C AI+ + L+F        E+L+  G+
Sbjct: 567 VCWQCEAIVTEMLRFTGSSFREAENLRKLGM 597


>AF039710-10|AAB96693.2|  393|Caenorhabditis elegans Hypothetical
           protein C46E10.9 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
 Frame = -1

Query: 529 FLSGKHFNRCRKIHP-----LLSLALQNLHLERFLQQHDQDFL*LVQSFDLQMLLC 377
           F +  + NR RKIH        ++  Q LH E  LQ+H    L     FD  ML C
Sbjct: 219 FANKPNLNRHRKIHSGTKSKKCNICQQTLHRENRLQEHLYTHLKERSHFDCPMLNC 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,973,516
Number of Sequences: 27780
Number of extensions: 364438
Number of successful extensions: 944
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)