Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26o05
         (339 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   1.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   3.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    20   7.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   9.4  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 7   SSSEPLQIHLKNAVVLLVK 63
           S SEPL+IH+     +L+K
Sbjct: 619 SLSEPLRIHVSPTTYILLK 637


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 123 TASSTALASWIVVHCYLLHHLHQKNNSIFQMYLQ 22
           T SS  L   + VH  + + L++K  +++Q Y Q
Sbjct: 418 TPSSLELGE-VAVHDPVFYQLYKKVMNLYQQYQQ 450


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 207 IITLFLDSIDKSSFTLFLNLPTRKMK 130
           I+  + DS+  S F L L    RKM+
Sbjct: 315 ILLYYRDSLALSVFALILTALLRKMQ 340


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 146 QQEK*KLAQLHQQHW 102
           QQ++ +  Q  QQHW
Sbjct: 450 QQQQQQQQQQQQQHW 464


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,133
Number of Sequences: 438
Number of extensions: 842
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)