Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26n15
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    29   3.2  
U97008-6|AAB52307.1|  323|Caenorhabditis elegans Serpentine rece...    28   5.5  
U64835-2|AAO25998.1|  337|Caenorhabditis elegans Serpentine rece...    28   5.5  
Z81509-1|CAB04154.1|  332|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF077530-1|AAC26266.1|  441|Caenorhabditis elegans Hypothetical ...    27   9.7  

>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 25/91 (27%), Positives = 39/91 (42%)
 Frame = -1

Query: 689 DVNAFKKLDSIQSKALRIITGAMKSSPVTALQVECVDPPLHLRRQYLSDKFVFKSLQIQN 510
           D N  +KL+     ALR   G  K +P   +  EC   PL    +  + +    +++  N
Sbjct: 707 DTN-LEKLEIAYRSALRACVGLTKDTPTDHIYQECRVLPLKEEYKLATQQMYLAAIK-SN 764

Query: 509 NHIITKLKTLNELIESSSFWKHKRLPCLIIS 417
            H    LK   +L  +S   K  R+P L +S
Sbjct: 765 THPCRDLKAKGQLERTS---KPPRIPPLKLS 792


>U97008-6|AAB52307.1|  323|Caenorhabditis elegans Serpentine
           receptor, class h protein275 protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 473 LIESSSFWKHKRLPCLIISYRKYLSIQTPTHH 378
           L     +W+H RLP LI +Y    S  TP ++
Sbjct: 121 LFAREHWWRHVRLPFLIFNYIAACSYFTPAYY 152


>U64835-2|AAO25998.1|  337|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 29 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 443 KRLPCLIISYRKYLSIQTPTHHSHIFPLFC 354
           K L  L +S  +Y S+  P HH  I+  +C
Sbjct: 125 KMLSTLAMSVNRYTSVNHPVHHKTIWMQYC 154


>Z81509-1|CAB04154.1|  332|Caenorhabditis elegans Hypothetical
           protein F21A3.1 protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 473 LIESSSFWKHKRLPCLIISYRKYLSIQTPTHHS 375
           L    S WKH R P LI++Y   +    PT+ S
Sbjct: 125 LYAKQSCWKHLRRPWLILNYTICVVYMIPTYLS 157


>AF077530-1|AAC26266.1|  441|Caenorhabditis elegans Hypothetical
           protein C40D2.3 protein.
          Length = 441

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = -1

Query: 674 KKLDSIQSK-ALRIITGAMKSSPVTALQVECVDPPLHLRRQYLSDKFVFKSLQIQNNHII 498
           KK  S+Q K  ++++  + K    T ++ E  +P  H   +++S + + +   + N+ I+
Sbjct: 61  KKKWSLQVKFTMKLVAVSGKFFQRT-VKNEFQNPEGHGMDKFISWENMLRDY-VNNDSIV 118

Query: 497 TKLKTLNELIESSSFWKHKRLPC 429
            ++    +++ SS F+KHK  PC
Sbjct: 119 IEINA--DIVSSSGFFKHKYSPC 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,556,164
Number of Sequences: 27780
Number of extensions: 330924
Number of successful extensions: 769
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)