Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26n14
         (731 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092864-1|BAC03993.1|  391|Homo sapiens protein ( Homo sapiens ...    31   4.3  
AF417489-1|AAN32667.1| 1445|Homo sapiens tensin 3 protein.             31   4.3  
AB208995-1|BAD92232.1| 1271|Homo sapiens Tensin 3 variant protein.     31   4.3  

>AK092864-1|BAC03993.1|  391|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35545 fis, clone SPLEN2003918, moderately
           similar to TENSIN. ).
          Length = 391

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +1

Query: 298 FIFKYQKEKSVLLLWIYNYGPGNQA----LVQIKYLLKISVQIKCLIQKHKS 441
           F+  YQ  + V    IYN GP N +    +++   LLK  V +KC  +K++S
Sbjct: 200 FLKLYQAMQPVYTSGIYNVGPENPSRICIVIEPAQLLKGDVMVKCYHKKYRS 251


>AF417489-1|AAN32667.1| 1445|Homo sapiens tensin 3 protein.
          Length = 1445

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +1

Query: 298 FIFKYQKEKSVLLLWIYNYGPGNQA----LVQIKYLLKISVQIKCLIQKHKS 441
           F+  YQ  + V    IYN GP N +    +++   LLK  V +KC  +K++S
Sbjct: 200 FLKLYQAMQPVYTSGIYNVGPENPSRICIVIEPAQLLKGDVMVKCYHKKYRS 251


>AB208995-1|BAD92232.1| 1271|Homo sapiens Tensin 3 variant protein.
          Length = 1271

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +1

Query: 298 FIFKYQKEKSVLLLWIYNYGPGNQA----LVQIKYLLKISVQIKCLIQKHKS 441
           F+  YQ  + V    IYN GP N +    +++   LLK  V +KC  +K++S
Sbjct: 310 FLKLYQAMQPVYTSGIYNVGPENPSRICIVIEPAQLLKGDVMVKCYHKKYRS 361


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,098,391
Number of Sequences: 237096
Number of extensions: 2016680
Number of successful extensions: 4016
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4009
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)