Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26n14
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039051-7|AAB94267.2|  304|Caenorhabditis elegans Serpentine re...    31   0.84 
AF067949-2|AAC19235.1|  357|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z68227-14|CAJ80809.1|  448|Caenorhabditis elegans Hypothetical p...    29   4.5  
AL034393-3|CAA22319.1|  348|Caenorhabditis elegans Hypothetical ...    28   5.9  
AF025457-3|AAB70963.2|  248|Caenorhabditis elegans Hypothetical ...    28   5.9  
AL021572-2|CAA16518.1|  415|Caenorhabditis elegans Hypothetical ...    28   7.8  
AF016665-5|ABP57825.1|  649|Caenorhabditis elegans Hypothetical ...    28   7.8  

>AF039051-7|AAB94267.2|  304|Caenorhabditis elegans Serpentine
           receptor, class x protein8 protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -2

Query: 532 VFAGDIHIFDYT*VF--NNTGMQRIILNQYLLCFCVSVSDILFGQIFLTDILFGQGLGSP 359
           +F GDI I  Y  V   N     ++I+  + L FC  +S + +  +F+T     +G+   
Sbjct: 150 IFVGDISIMSYMAVTIPNVYSYSKLIILSFDL-FCTGISTVCYASVFITIRNASKGIEDA 208

Query: 358 ARNYKSTKAVHFFL 317
           A + K  +   + L
Sbjct: 209 ANSKKRKQDTRYLL 222


>AF067949-2|AAC19235.1|  357|Caenorhabditis elegans Hypothetical
           protein T10H9.1 protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/73 (23%), Positives = 35/73 (47%)
 Frame = -3

Query: 687 FISIKTCVKQFCK**FSSANLNAWILASFRFCIDK*ISFLMIRLYFSKLFILFSQGTYIF 508
           F +I T +  F +   +    +  I +SF   +DK    + + +   ++F LF    Y F
Sbjct: 71  FFTIPTYLNLFYRNNLNCPRWSILIGSSFEIGLDKVRHIITLSIAAERIFALFRPSEYFF 130

Query: 507 LIIRKFLTIRVCS 469
           L   K +++++C+
Sbjct: 131 L-DHKMISLKICA 142


>Z68227-14|CAJ80809.1|  448|Caenorhabditis elegans Hypothetical
           protein F49C12.7b protein.
          Length = 448

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 211 LSTQWLCSYPDVVC*LLPAILSVVFVFHLKPY--SNWNLGHLMFSSLPFRRIFA 56
           L+T +  +YP V   LLPA+ +V+ +   + +  + W L HL   S  F RI +
Sbjct: 381 LTTTYNLAYPRVSAYLLPALTAVLELSQCQTFLQNQWLLVHLFRRSKEFIRILS 434


>AL034393-3|CAA22319.1|  348|Caenorhabditis elegans Hypothetical
           protein Y18D10A.3 protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 25  LQVVYIKRMKKQKFVGTVAKKTSSVLNSNLNKALDER 135
           +Q  Y+K  KK   V  ++KKT S +   L   +DE+
Sbjct: 101 IQQFYMKNGKKSTMVHIISKKTVSFIGQKLAAQIDEQ 137


>AF025457-3|AAB70963.2|  248|Caenorhabditis elegans Hypothetical
           protein C08E3.5 protein.
          Length = 248

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/63 (22%), Positives = 31/63 (49%)
 Frame = +1

Query: 325 SVLLLWIYNYGPGNQALVQIKYLLKISVQIKCLIQKHKSIANIDLK*YAAYPYC*KLTYN 504
           SV+ L + N    +  ++ +  L+K+S   + +++  K + N     Y+   +C  + YN
Sbjct: 13  SVMPLHVINEILDHMEIIDLMVLMKVSRNFRSVVRNMKVLINWLTLNYSEKLHCVSIVYN 72

Query: 505 QKY 513
            +Y
Sbjct: 73  MRY 75


>AL021572-2|CAA16518.1|  415|Caenorhabditis elegans Hypothetical
           protein W06H3.2 protein.
          Length = 415

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 27/97 (27%), Positives = 38/97 (39%)
 Frame = -1

Query: 335 SSTLFSFWYLKIKQLYC*NQFFNWQA*SLASCNCFLRIMFFSFNSMALLIS*CCLLVASR 156
           S T  SF + K  +L   N  F     +LA  N  L I   + N            ++S 
Sbjct: 153 SYTCPSFVFAKPTELT--NSSFRLSPETLAEVNSILSIYLGTHNFFNYTAKRAYDDMSSN 210

Query: 155 NFICSFRLSSKALFKLEFRTLDVFFATVPTNFCFFIL 45
            +I SF      LF+ +FR  DV F  +      F+L
Sbjct: 211 RYIISFECKEPFLFRDDFRKEDVEFVQIVIKGQSFVL 247


>AF016665-5|ABP57825.1|  649|Caenorhabditis elegans Hypothetical
           protein C49D10.4 protein.
          Length = 649

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
 Frame = +2

Query: 482 IVKNLRIIKNMYVPCENK------IKSLEKYNRIMRKLIYLSIQKRNDARIQALRLA--- 634
           I K+ +++  + +P EN       + +L+KY +I++K IY+ +        +  +LA   
Sbjct: 502 IDKHSKLLSPLTIPIENDQIFKEALATLKKYEKIVKKKIYMVVSYVPPLDYKLTKLANYL 561

Query: 635 -EENYYLQNCFTQVLIEINDLHCDNRII 715
            +     QN FT   I +N L     ++
Sbjct: 562 DDGKNVTQNVFTTNFIYLNGLKRQGELV 589


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,699,465
Number of Sequences: 27780
Number of extensions: 359755
Number of successful extensions: 919
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)