Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26n10
(711 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375... 35 0.073
09_04_0323 - 16679565-16679939,16680328-16680660,16680721-166810... 34 0.097
11_06_0377 - 22900042-22900452,22900527-22902236 32 0.52
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 31 0.90
11_01_0522 - 4103138-4103926 31 1.2
07_03_1562 - 27738369-27738568,27738767-27738962,27739079-277392... 30 1.6
01_06_1409 - 37111954-37112061,37112295-37112330,37112434-371124... 30 1.6
02_04_0171 + 20581995-20582354,20582509-20583141,20584954-20585058 30 2.1
02_04_0170 + 20576149-20576889 30 2.1
01_06_0264 + 28005997-28006823,28007107-28007290,28007603-28007701 29 2.8
11_04_0475 - 18176578-18177252,18180101-18180664 29 3.6
07_03_0288 + 16285485-16285721,16285811-16286184,16286499-162868... 29 3.6
04_03_0515 + 16698589-16701066 29 3.6
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 29 4.8
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 29 4.8
01_06_0297 + 28296742-28297830 29 4.8
09_04_0230 + 15872505-15872851,15872963-15873140 28 6.4
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 28 8.4
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 28 8.4
>03_05_0175 +
21513767-21513903,21534361-21535385,21537375-21537547,
21537849-21538679
Length = 721
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 371 PQEKEILQNQLPKRNPTERETSEQGRDHSLRQQHGANRPQHRRGRRDQ 228
PQE++ Q Q + P E+ EQ + +QQ NRPQ ++ ++ Q
Sbjct: 567 PQEQQQQQQQKQQIKPQEKMGKEQTKPEEQQQQQKTNRPQEQQHKKPQ 614
>09_04_0323 -
16679565-16679939,16680328-16680660,16680721-16681032,
16683590-16683825,16683972-16684239
Length = 507
Score = 34.3 bits (75), Expect = 0.097
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 503 VGRLDARGRTPGLLSIHESEARESAAHDMDHDEPVAAPRDGPVRLL-PEPAALRGASPER 679
+G A G+ P + R AA D +EPV P P +L PAA P R
Sbjct: 1 MGLSPAEGK-PAWTDERSAAGRRQAARDKGKEEPVTLPPLPPAAVLGSSPAARTRLRPRR 59
Query: 680 LRAAALRPPP 709
++A PPP
Sbjct: 60 RPSSAPHPPP 69
>11_06_0377 - 22900042-22900452,22900527-22902236
Length = 706
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -2
Query: 695 GPLPGVARATLRGGRPVQVVAVRAHLAALPRVRRDPYHE 579
GP P A +R GR Q+ A RAH PRVRRD E
Sbjct: 416 GPRPDGEEARVRCGRAYQL-APRAHAQEEPRVRRDRAQE 453
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 31.1 bits (67), Expect = 0.90
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 527 RTPGLLSIHESEARESAAHDMDHDEPV--AAPRDGPVRLLPEPAALRGASPERLRAAALR 700
R GL ++ E D D PV + PRDG +LL EP L G SP A+
Sbjct: 558 RVQGLDALKEHFKNSKFPCDSDEYLPVVFSPPRDG--KLLTEPVPLVGRSPAPSSASGAS 615
Query: 701 PPP 709
PP
Sbjct: 616 SPP 618
>11_01_0522 - 4103138-4103926
Length = 262
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 575 AAHDMDHDEPVAAPRDG 625
AAH+ DHDEP AAP G
Sbjct: 163 AAHEADHDEPAAAPAYG 179
>07_03_1562 - 27738369-27738568,27738767-27738962,27739079-27739230,
27739775-27739832,27739923-27740038,27740117-27740237,
27740348-27740635,27740817-27740987,27741091-27741741,
27742515-27742676,27742764-27743904,27743992-27744152,
27744239-27744564,27745678-27745825
Length = 1296
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = -2
Query: 485 ALCVFWTDTVIKICISIFDYRFRDFHQHRPEM*AVDHHPQEKEILQNQLPKRNPTERETS 306
A C + +K+CI FD + HQ + E A + + + L K T+R
Sbjct: 1164 AKCKKFAKPDLKVCIEEFDEKLSKVHQEKKEQEATTRNAEAHKQRIGSLDKLMVTKRTGK 1223
Query: 305 EQGRDHSLRQQ 273
++G+ + ++
Sbjct: 1224 DKGKSAEVAEE 1234
>01_06_1409 -
37111954-37112061,37112295-37112330,37112434-37112498,
37112610-37112688,37112967-37113041,37113623-37114147
Length = 295
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -2
Query: 410 HQHRPEM*AVDHHPQEKEILQNQLPKRNPTERETSEQGRDHSLRQQHGANRPQHRRGRRD 231
HQH + Q++++ Q Q ++ +++ +Q + +QQ N+PQH +
Sbjct: 49 HQHLQQQ--QQQQQQQQKLQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQNQPQHSSQQSQ 106
Query: 230 QT 225
QT
Sbjct: 107 QT 108
>02_04_0171 + 20581995-20582354,20582509-20583141,20584954-20585058
Length = 365
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 602 PVAAPRDGPVRLLPEPAALRGASPERLRAAALRPPP 709
PVA P+ G L P PAA+ P AAA+ PPP
Sbjct: 228 PVAPPQAGTWPL-PAPAAMPPPPPPPTGAAAVAPPP 262
>02_04_0170 + 20576149-20576889
Length = 246
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 602 PVAAPRDGPVRLLPEPAALRGASPERLRAAALRPPP 709
PVA P+ G L P PAA+ P AAA+ PPP
Sbjct: 109 PVAPPQAGTWPL-PAPAAMPPPPPPPTGAAAVAPPP 143
>01_06_0264 + 28005997-28006823,28007107-28007290,28007603-28007701
Length = 369
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 516 MLAAGPLAYYLYTRAKPESQPLMIWI-----TTNPWQRREMGPYGYYLNRPPSAERRPSD 680
++A GP A+ L A P +Q + W+ T + Q+ E YGY + P+ +RR D
Sbjct: 123 LVATGPRAF-LMAMALPLAQSAISWVVSFFTTRSRRQQEEEESYGYDYDDDPAFQRREED 181
>11_04_0475 - 18176578-18177252,18180101-18180664
Length = 412
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 545 SIHESEARESAAHDMDHD---EPVAAPRDGPVRLLPEPAALRGAS 670
S H S + S A DMD D EP AA P P PA AS
Sbjct: 3 SAHSSHSSVSTAADMDEDDDDEPSAASAAAPAPPAPAPAPPASAS 47
>07_03_0288 +
16285485-16285721,16285811-16286184,16286499-16286892,
16286917-16287806,16291189-16291446,16291518-16291628,
16291697-16291775,16291880-16291972,16292095-16292280
Length = 873
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 605 VAAPRDGPV--RLLPEPAALRGASPERLRAAALRPPP 709
VA+PRD P+ R PEP + PE A+ RP P
Sbjct: 436 VASPRDSPIASRPRPEPLVASPSGPEPPVASPPRPEP 472
>04_03_0515 + 16698589-16701066
Length = 825
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -3
Query: 397 QKCKL*ITIHRKRRFCKTSSQNGTLRNAKRLNKAAIILCASSTAPTAHNTVGAAV---TR 227
+K +L T R+RR TS + T R ++I+ ++ + TA +T AA R
Sbjct: 45 EKPRLLTTARRRRRRRSTSVMSQTTAPMSRRRLSSILASTATASSTAASTTTAATASPAR 104
Query: 226 PSP 218
PSP
Sbjct: 105 PSP 107
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 698 AGPLPGVARATLRGGRPVQVVAVRAHLAALPRVRRDP 588
AG P V + G PVQ V AA P + DP
Sbjct: 425 AGVYPPVGQTAFPGSLPVQTPTVLPQTAATPAITNDP 461
>04_01_0399 -
5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 593 HDEPVAAPRDGPVRLLPEPAALRGASPERLRAAALRPPP 709
H P PR P+R +P P A+ R+RA RPPP
Sbjct: 185 HPVPYLNPR--PIRAVPPPEAMEMLESRRVRA---RPPP 218
>01_06_0297 + 28296742-28297830
Length = 362
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -2
Query: 704 EGAGP--LPGVARATLRGGRPVQVVAVRAHLAALPRVRRDPYHERLTLWLRS 555
+ AGP L G+ R GRPV + A V RD R LW +S
Sbjct: 37 QDAGPAALEGLIRRQANAGRPVSFIVANAFAPWAAGVARDMGVPRAMLWTQS 88
>09_04_0230 + 15872505-15872851,15872963-15873140
Length = 174
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 641 PEPAALRGASPERLRAAA 694
P PAA+RG SP RL A A
Sbjct: 157 PPPAAIRGGSPRRLLAVA 174
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = -2
Query: 458 VIKICISIFD-YRFRDFHQHRPEM*AVDHHPQEKEILQNQLPKRNPT---ERETSEQG 297
V++ C S D YRF DFH H + + N +P + + R T QG
Sbjct: 3359 VLEYCFSDMDPYRFSDFHIHEESRVSNQQSEIMNSSISNSMPSSSSSVSYHRNTQRQG 3416
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 371 PQEKEILQNQLPKRNPTERETSEQGRDHSLRQQHGANR 258
PQ K+ + + P+R P E E ++ R +S + G R
Sbjct: 180 PQRKDTHRAKSPRRQPKEHEVDKKRRSYSPANKDGDRR 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,087,207
Number of Sequences: 37544
Number of extensions: 468536
Number of successful extensions: 1888
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1886
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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