Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26n04
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81555-4|CAB04515.1|  202|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AY519854-1|AAR89635.1|  229|Caenorhabditis elegans arsenite indu...    50   1e-06
Z93374-9|CAC70078.1|  116|Caenorhabditis elegans Hypothetical pr...    35   0.067
Z93374-8|CAB07555.1|  359|Caenorhabditis elegans Hypothetical pr...    35   0.067
AF273796-1|AAG15144.1|  116|Caenorhabditis elegans nuclear recep...    35   0.067
AF016420-3|AAB65310.1|  291|Caenorhabditis elegans Serpentine re...    30   1.9  
U53148-2|AAB37078.1|  360|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z99281-31|CAI79273.1|  160|Caenorhabditis elegans Hypothetical p...    29   4.4  
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p...    29   4.4  
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ...    29   4.4  
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha...    29   4.4  
Z92830-11|CAB07351.1|  165|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p...    28   5.8  
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum...    28   5.8  
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane...    28   5.8  
AF000261-7|AAB52927.2|  340|Caenorhabditis elegans Serpentine re...    28   7.7  

>Z81555-4|CAB04515.1|  202|Caenorhabditis elegans Hypothetical
           protein F58E10.4 protein.
          Length = 202

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 16/85 (18%)
 Frame = +3

Query: 210 EFPTLGENCQYPGCNQTDFLPLQCK-CAKVFCREHFN---THCLSGE-----------CE 344
           EFP LG++C+   CN+ DFLP++C  C   +C EHF     +C +G            CE
Sbjct: 3   EFPNLGKHCESTVCNRLDFLPIKCSGCGHFYCSEHFTFEAHNCPTGSRISVQVPICPICE 62

Query: 345 L-APQPKEVNLKKDDQIFKCSEKSC 416
              P PK+VN+  D Q+ +  + +C
Sbjct: 63  KPVPTPKDVNV--DQQVNEHIQNNC 85


>AY519854-1|AAR89635.1|  229|Caenorhabditis elegans arsenite
           inducible RNA associatedprotein (aip-1) protein.
          Length = 229

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 16/85 (18%)
 Frame = +3

Query: 210 EFPTLGENCQYPGCNQTDFLPLQCK-CAKVFCREHFN---THCLSGE-----------CE 344
           EFP LG++C+   CN+ DFLP++C  C   +C EHF     +C +G            CE
Sbjct: 30  EFPNLGKHCESTVCNRLDFLPIKCSGCGHFYCSEHFTFEAHNCPTGSRISVQVPICPICE 89

Query: 345 L-APQPKEVNLKKDDQIFKCSEKSC 416
              P PK+VN+  D Q+ +  + +C
Sbjct: 90  KPVPTPKDVNV--DQQVNEHIQNNC 112


>Z93374-9|CAC70078.1|  116|Caenorhabditis elegans Hypothetical
           protein C06C6.5b protein.
          Length = 116

 Score = 34.7 bits (76), Expect = 0.067
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +3

Query: 234 CQYPGCNQTD--FLPLQCKCAKVFCREHFNTHCLSGECELAPQPKEVNLKKDDQIFKCSE 407
           CQ  GC+  +  F  L C+    F R +F++  + G+C  A + +  +  ++ +I KC  
Sbjct: 3   CQVCGCSDVEPHFGALSCRACAAFFRRYFHSKKVVGQCNCAVRFRNSHPCRECRIKKCLS 62

Query: 408 KSCNKGNIHE 437
              N   + E
Sbjct: 63  IGMNPEKVQE 72


>Z93374-8|CAB07555.1|  359|Caenorhabditis elegans Hypothetical
           protein C06C6.5a protein.
          Length = 359

 Score = 34.7 bits (76), Expect = 0.067
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +3

Query: 234 CQYPGCNQTD--FLPLQCKCAKVFCREHFNTHCLSGECELAPQPKEVNLKKDDQIFKCSE 407
           CQ  GC+  +  F  L C+    F R +F++  + G+C  A + +  +  ++ +I KC  
Sbjct: 3   CQVCGCSDVEPHFGALSCRACAAFFRRYFHSKKVVGQCNCAVRFRNSHPCRECRIKKCLS 62

Query: 408 KSCNKGNIHE 437
              N   + E
Sbjct: 63  IGMNPEKVQE 72


>AF273796-1|AAG15144.1|  116|Caenorhabditis elegans nuclear receptor
           NHR-50 protein.
          Length = 116

 Score = 34.7 bits (76), Expect = 0.067
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +3

Query: 234 CQYPGCNQTD--FLPLQCKCAKVFCREHFNTHCLSGECELAPQPKEVNLKKDDQIFKCSE 407
           CQ  GC+  +  F  L C+    F R +F++  + G+C  A + +  +  ++ +I KC  
Sbjct: 3   CQVCGCSDVEPHFGALSCRACAAFFRRYFHSKKVVGQCNCAVRFRNSHPCRECRIKKCLS 62

Query: 408 KSCNKGNIHE 437
              N   + E
Sbjct: 63  IGMNPEKVQE 72


>AF016420-3|AAB65310.1|  291|Caenorhabditis elegans Serpentine
           receptor, class sx protein13 protein.
          Length = 291

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -3

Query: 564 SVIIPCKCLFASLNCLFGASNCSIFAARVSSSISGHEI*NKSSHECFLYCNFF 406
           S++   +C+F +L CLFG S C++   ++          N    ECF+Y +F+
Sbjct: 44  SLLQSAQCVFQTL-CLFGTSLCALLTLKL----------NIKRRECFMYISFY 85


>U53148-2|AAB37078.1|  360|Caenorhabditis elegans Hypothetical
           protein C26F1.6 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = -1

Query: 671 MVECFSGRRLSVLFSSSEFSMPFSLLLTIVVLYVCFLLSFLVNV 540
           ++E    RR  V     E S    +++ ++V  VC++ SF++N+
Sbjct: 206 IIEASEQRRELVASVKREHSTAKMMIMVVLVFLVCYIFSFILNI 249


>Z99281-31|CAI79273.1|  160|Caenorhabditis elegans Hypothetical
           protein Y57G11C.51 protein.
          Length = 160

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 575 KALQSSAKVKTASKIHLMRIKQKASGPKSIPPSDRV 682
           K +  S K +  +K +  R  +K SGPK   PSD V
Sbjct: 23  KKMSPSKKKEENAKSNANRASRKGSGPKKAKPSDAV 58


>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
            protein T22A3.8 protein.
          Length = 3102

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/59 (38%), Positives = 26/59 (44%)
 Frame = +3

Query: 213  FPTLGENCQYPGCNQTDFLPLQCKCAKVFCREHFNTHCLSGECELAPQPKEVNLKKDDQ 389
            FPT    C+  GCN     PLQCK  +  C E        GEC   P  K V+  K DQ
Sbjct: 1221 FPT----CEPCGCNAAGTDPLQCKDGQCLCNE-------IGEC---PCKKNVHGTKCDQ 1265


>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
            protein T22A3.8 protein.
          Length = 3102

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/59 (38%), Positives = 26/59 (44%)
 Frame = +3

Query: 213  FPTLGENCQYPGCNQTDFLPLQCKCAKVFCREHFNTHCLSGECELAPQPKEVNLKKDDQ 389
            FPT    C+  GCN     PLQCK  +  C E        GEC   P  K V+  K DQ
Sbjct: 1221 FPT----CEPCGCNAAGTDPLQCKDGQCLCNE-------IGEC---PCKKNVHGTKCDQ 1265


>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
            chain protein.
          Length = 3102

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/59 (38%), Positives = 26/59 (44%)
 Frame = +3

Query: 213  FPTLGENCQYPGCNQTDFLPLQCKCAKVFCREHFNTHCLSGECELAPQPKEVNLKKDDQ 389
            FPT    C+  GCN     PLQCK  +  C E        GEC   P  K V+  K DQ
Sbjct: 1221 FPT----CEPCGCNAAGTDPLQCKDGQCLCNE-------IGEC---PCKKNVHGTKCDQ 1265


>Z92830-11|CAB07351.1|  165|Caenorhabditis elegans Hypothetical
           protein F11A5.13 protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 617 FSMPFSLLLTIVVLYVCFLLSFLVNVC 537
           F   F+L L I+ +Y+C     LV VC
Sbjct: 114 FKFGFALSLVIISVYICIFTKCLVKVC 140


>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
            K08E5.3b protein.
          Length = 3183

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 216  PTLGENCQYPG-CNQTDFLPLQCKCAKVFCREHFNTHCLS-GECELAPQ 356
            P L  +C +P  C  T +   +C C + + R++ +  C+S  E +++PQ
Sbjct: 888  PQLITSCIFPEECQITPYKNFRCSCPEGYNRDYRSGFCVSVKEVQISPQ 936


>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
            K08E5.3a protein.
          Length = 3767

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 216  PTLGENCQYPG-CNQTDFLPLQCKCAKVFCREHFNTHCLS-GECELAPQ 356
            P L  +C +P  C  T +   +C C + + R++ +  C+S  E +++PQ
Sbjct: 1472 PQLITSCIFPEECQITPYKNFRCSCPEGYNRDYRSGFCVSVKEVQISPQ 1520


>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
            protein K08E5.3b protein.
          Length = 3183

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 216  PTLGENCQYPG-CNQTDFLPLQCKCAKVFCREHFNTHCLS-GECELAPQ 356
            P L  +C +P  C  T +   +C C + + R++ +  C+S  E +++PQ
Sbjct: 888  PQLITSCIFPEECQITPYKNFRCSCPEGYNRDYRSGFCVSVKEVQISPQ 936


>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
            protein K08E5.3a protein.
          Length = 3767

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 216  PTLGENCQYPG-CNQTDFLPLQCKCAKVFCREHFNTHCLS-GECELAPQ 356
            P L  +C +P  C  T +   +C C + + R++ +  C+S  E +++PQ
Sbjct: 1472 PQLITSCIFPEECQITPYKNFRCSCPEGYNRDYRSGFCVSVKEVQISPQ 1520


>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
           homolog protein 1 protein.
          Length = 1722

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
 Frame = +3

Query: 276 QCKCAKVF----CREHFNTHCLSGEC 341
           QC+C K F    C+++ + HCL G C
Sbjct: 43  QCECPKGFSGLLCQDNCSLHCLHGNC 68


>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
            adhesion receptorMUA-3 precursor protein.
          Length = 3767

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 216  PTLGENCQYPG-CNQTDFLPLQCKCAKVFCREHFNTHCLS-GECELAPQ 356
            P L  +C +P  C  T +   +C C + + R++ +  C+S  E +++PQ
Sbjct: 1472 PQLITSCIFPEECQITPYKNFRCSCPEGYNRDYRSGFCVSVKEVQISPQ 1520


>AF000261-7|AAB52927.2|  340|Caenorhabditis elegans Serpentine
           receptor, class x protein98 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 683 ILGQMVE-CFSGRRLSVLFSSSEFSMPFSLLLTIVVLYVCFLLSFLVNV 540
           I G M + C S  R  V++  S        +LTI  L +C+ +S +V V
Sbjct: 137 IQGPMTQVCISFNRFMVIYFVSLAKRKSGRVLTITALSICWTISLIVTV 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,322,147
Number of Sequences: 27780
Number of extensions: 340410
Number of successful extensions: 1013
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)