Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26m22
         (527 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81039-3|CAB02775.1|  325|Caenorhabditis elegans Hypothetical pr...    31   0.67 
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81485-4|CAB03978.1|  343|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z81111-7|CAB03270.1|  342|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z81099-5|CAB03190.1|  342|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AF043697-2|AAB97556.1|  820|Caenorhabditis elegans Patched relat...    27   8.3  

>Z81039-3|CAB02775.1|  325|Caenorhabditis elegans Hypothetical
           protein C25D7.4 protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 0.67
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +1

Query: 289 LTSLCLNILEIKAKNVCIT---CEEISCFLLVLNTNSVAVLYVNNIYDLPVFMENYQN*M 459
           LT L   +  I  K +  T   CEE+   L +LN N++  + +N  +   + +ENY   +
Sbjct: 151 LTELMRRVEPINTKTISFTRMHCEEMKSILSLLNANNIEKIELN--FHHGILLENYLAQL 208

Query: 460 YIWFN 474
             W N
Sbjct: 209 EQWKN 213


>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical
           protein B0365.7 protein.
          Length = 2769

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -2

Query: 271 FNKLYYKHLKIMHHTHSTLQTTIFQRDHTIMVVQAFHLNA*TNNI 137
           F+KL   H K + H  S L+  I   DH  +V++   L +  N++
Sbjct: 616 FSKLSTLHFKTLLHHESCLRMRISDVDHNSLVIETERLQSEKNDL 660


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical
           protein B0365.7 protein.
          Length = 2769

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -2

Query: 271 FNKLYYKHLKIMHHTHSTLQTTIFQRDHTIMVVQAFHLNA*TNNI 137
           F+KL   H K + H  S L+  I   DH  +V++   L +  N++
Sbjct: 616 FSKLSTLHFKTLLHHESCLRMRISDVDHNSLVIETERLQSEKNDL 660


>Z81485-4|CAB03978.1|  343|Caenorhabditis elegans Hypothetical
           protein C49F5.4 protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 112 DTNLKLDEYSELSLLLFLKPQVVILSTN 29
           + N++ DE+  LS+LLF  P +  LS N
Sbjct: 237 ELNIQNDEFYLLSVLLFCNPAITNLSEN 264


>Z81111-7|CAB03270.1|  342|Caenorhabditis elegans Hypothetical
           protein T01G5.5 protein.
          Length = 342

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 352 EISC-FLLVLNTNSVAVLYVNNIYDLPVFMENYQN*MYIWFNVF 480
           EI+C FL  + T   A+  V +   +  F++NY+N +  WF+ F
Sbjct: 277 EINCQFLATILTFVYAIYPVLDPLPIFFFVQNYRNALSEWFSCF 320


>Z81099-5|CAB03190.1|  342|Caenorhabditis elegans Hypothetical
           protein T01G5.5 protein.
          Length = 342

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 352 EISC-FLLVLNTNSVAVLYVNNIYDLPVFMENYQN*MYIWFNVF 480
           EI+C FL  + T   A+  V +   +  F++NY+N +  WF+ F
Sbjct: 277 EINCQFLATILTFVYAIYPVLDPLPIFFFVQNYRNALSEWFSCF 320


>AF043697-2|AAB97556.1|  820|Caenorhabditis elegans Patched related
           family protein 11 protein.
          Length = 820

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 334 VCITCEEISCFLLVLNTNSVAVL 402
           V + C  I CF+ + N N+VAV+
Sbjct: 646 VTVVCMAIVCFVFIANFNAVAVI 668


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,606,147
Number of Sequences: 27780
Number of extensions: 200729
Number of successful extensions: 510
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)