Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26m22
         (527 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   1.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.5  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   4.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.5  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   5.9  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   7.8  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   7.8  

>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -1

Query: 257 LQTS*NYASYTFYFANY-HFSKRSYY 183
           L  + NY++Y  Y  NY +++K+ YY
Sbjct: 85  LSNNYNYSNYNNYNNNYNNYNKKLYY 110


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 468 PNVHLVLVIFHEYRQIVNVVYIQDCHAICI 379
           PNV+ V  +  +Y  +  +     CHA CI
Sbjct: 457 PNVYKVETVGDKYMAVSGLPEPCRCHARCI 486


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 242 NYASYTFYFANYHFSKRSYYYGCTSI 165
           NY +Y  Y  NY+ + +  YY    I
Sbjct: 333 NYNNYNNYNNNYNNNYKKLYYNINYI 358


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 468 PNVHLVLVIFHEYRQIVNVVYIQDCHAICI 379
           PNV+ V  +  +Y  +  +     CHA CI
Sbjct: 457 PNVYKVETVGDKYMAVSGLPEPCRCHARCI 486


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 242 NYASYTFYFANYHFSKRSYY 183
           NY +Y +   NY+  K+ YY
Sbjct: 100 NYNNYNYNNNNYNNYKKLYY 119


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +1

Query: 280 VFALTSLCLNILEIKAKNVCITCEEISCFLLVLNTNSVAVLYVNNIYD 423
           + AL  +C  + E+ +++   T  +     +VLNT  +   YVN + D
Sbjct: 5   LIALVPVCFLLGEVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLD 52


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +1

Query: 280 VFALTSLCLNILEIKAKNVCITCEEISCFLLVLNTNSVAVLYVNNIYD 423
           + AL  +C  + E+ +++   T  +     +VLNT  +   YVN + D
Sbjct: 5   LIALVPVCFLLGEVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLD 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,183
Number of Sequences: 438
Number of extensions: 2609
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)