Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26m18
(359 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022440-1|AAH22440.1| 96|Homo sapiens LSM8 homolog, U6 small ... 92 4e-19
BC002742-1|AAH02742.1| 96|Homo sapiens LSM8 homolog, U6 small ... 92 4e-19
AF182294-1|AAD56232.1| 96|Homo sapiens U6 snRNA-associated Sm-... 92 4e-19
AC006389-1|AAD15542.1| 96|Homo sapiens WUGSC:H_RG437B22.1 prot... 92 4e-19
BC045532-1|AAH45532.1| 67|Homo sapiens LSM8 protein protein. 52 7e-07
D79997-1|BAA11492.2| 656|Homo sapiens KIAA0175 protein. 34 0.15
BC014039-1|AAH14039.1| 651|Homo sapiens maternal embryonic leuc... 34 0.15
AL442063-1|CAI16995.2| 651|Homo sapiens maternal embryonic leuc... 34 0.15
AL354932-1|CAI11034.2| 651|Homo sapiens maternal embryonic leuc... 34 0.15
AK222811-1|BAD96531.1| 651|Homo sapiens maternal embryonic leuc... 34 0.15
M62840-1|AAA35506.1| 575|Homo sapiens acyloxyacyl hydrolase pro... 29 3.3
BC025698-1|AAH25698.1| 575|Homo sapiens acyloxyacyl hydrolase (... 29 3.3
BC001767-1|AAH01767.1| 133|Homo sapiens LSM1 homolog, U6 small ... 29 3.3
AK223476-1|BAD97196.1| 575|Homo sapiens acyloxyacyl hydrolase p... 29 3.3
AJ238094-1|CAB45865.1| 133|Homo sapiens Lsm1 protein protein. 29 3.3
AF000177-1|AAB62189.1| 133|Homo sapiens CaSm protein. 29 3.3
>BC022440-1|AAH22440.1| 96|Homo sapiens LSM8 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 96
Score = 92.3 bits (219), Expect = 4e-19
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = +3
Query: 150 ESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 320
ESHERVFSS+ GV QVVLGL+I+RGDNVA++G+IDE DS LDLGNI+AEPL + H
Sbjct: 40 ESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96
>BC002742-1|AAH02742.1| 96|Homo sapiens LSM8 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 96
Score = 92.3 bits (219), Expect = 4e-19
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = +3
Query: 150 ESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 320
ESHERVFSS+ GV QVVLGL+I+RGDNVA++G+IDE DS LDLGNI+AEPL + H
Sbjct: 40 ESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96
>AF182294-1|AAD56232.1| 96|Homo sapiens U6 snRNA-associated
Sm-like protein LSm8 protein.
Length = 96
Score = 92.3 bits (219), Expect = 4e-19
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = +3
Query: 150 ESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 320
ESHERVFSS+ GV QVVLGL+I+RGDNVA++G+IDE DS LDLGNI+AEPL + H
Sbjct: 40 ESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96
>AC006389-1|AAD15542.1| 96|Homo sapiens WUGSC:H_RG437B22.1
protein.
Length = 96
Score = 92.3 bits (219), Expect = 4e-19
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = +3
Query: 150 ESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGPMVH 320
ESHERVFSS+ GV QVVLGL+I+RGDNVA++G+IDE DS LDLGNI+AEPL + H
Sbjct: 40 ESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH 96
>BC045532-1|AAH45532.1| 67|Homo sapiens LSM8 protein protein.
Length = 67
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +3
Query: 150 ESHERVFSSTSGVAQVVLGLHIIRGDNV 233
ESHERVFSS+ GV QVVLGL+I+RGDNV
Sbjct: 40 ESHERVFSSSQGVEQVVLGLYIVRGDNV 67
>D79997-1|BAA11492.2| 656|Homo sapiens KIAA0175 protein.
Length = 656
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +3
Query: 138 IKQYESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAE 299
+K YE HE + T G A+V L HI+ G+ VAI ++ S DL IK E
Sbjct: 13 LKYYELHETI--GTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTE 62
>BC014039-1|AAH14039.1| 651|Homo sapiens maternal embryonic leucine
zipper kinase protein.
Length = 651
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +3
Query: 138 IKQYESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAE 299
+K YE HE + T G A+V L HI+ G+ VAI ++ S DL IK E
Sbjct: 8 LKYYELHETI--GTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTE 57
>AL442063-1|CAI16995.2| 651|Homo sapiens maternal embryonic leucine
zipper kinase protein.
Length = 651
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +3
Query: 138 IKQYESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAE 299
+K YE HE + T G A+V L HI+ G+ VAI ++ S DL IK E
Sbjct: 8 LKYYELHETI--GTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTE 57
>AL354932-1|CAI11034.2| 651|Homo sapiens maternal embryonic leucine
zipper kinase protein.
Length = 651
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +3
Query: 138 IKQYESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAE 299
+K YE HE + T G A+V L HI+ G+ VAI ++ S DL IK E
Sbjct: 8 LKYYELHETI--GTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTE 57
>AK222811-1|BAD96531.1| 651|Homo sapiens maternal embryonic leucine
zipper kinase variant protein.
Length = 651
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +3
Query: 138 IKQYESHERVFSSTSGVAQVVLGLHIIRGDNVAIVGQIDESIDSRLDLGNIKAE 299
+K YE HE + T G A+V L HI+ G+ VAI ++ S DL IK E
Sbjct: 8 LKYYELHETI--GTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTE 57
>M62840-1|AAA35506.1| 575|Homo sapiens acyloxyacyl hydrolase
protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 116 SGLENYVNQTVRISRKSVFLHKWRRSSSTWTSHNQRRQCGNSRAN 250
SG +++ TV I KS++L W+R+ + + G S N
Sbjct: 302 SGATGFLDSTVGIKEKSIYLRLWKRNHCNHRDYQNISRNGASSRN 346
>BC025698-1|AAH25698.1| 575|Homo sapiens acyloxyacyl hydrolase
(neutrophil) protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 116 SGLENYVNQTVRISRKSVFLHKWRRSSSTWTSHNQRRQCGNSRAN 250
SG +++ TV I KS++L W+R+ + + G S N
Sbjct: 302 SGATGFLDSTVGIKEKSIYLRLWKRNHCNHRDYQNISRNGASSRN 346
>BC001767-1|AAH01767.1| 133|Homo sapiens LSM1 homolog, U6 small
nuclear RNA associated (S. cerevisiae) protein.
Length = 133
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 204 GLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPL 305
G+ ++RG+NV ++G+ID +S L + E +
Sbjct: 62 GIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEI 95
>AK223476-1|BAD97196.1| 575|Homo sapiens acyloxyacyl hydrolase
precursor variant protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 116 SGLENYVNQTVRISRKSVFLHKWRRSSSTWTSHNQRRQCGNSRAN 250
SG +++ TV I KS++L W+R+ + + G S N
Sbjct: 302 SGATGFLDSTVGIKEKSIYLRLWKRNHCNHRDYQNISRNGASSRN 346
>AJ238094-1|CAB45865.1| 133|Homo sapiens Lsm1 protein protein.
Length = 133
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 204 GLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPL 305
G+ ++RG+NV ++G+ID +S L + E +
Sbjct: 62 GIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEI 95
>AF000177-1|AAB62189.1| 133|Homo sapiens CaSm protein.
Length = 133
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 204 GLHIIRGDNVAIVGQIDESIDSRLDLGNIKAEPL 305
G+ ++RG+NV ++G+ID +S L + E +
Sbjct: 62 GIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEI 95
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,788,733
Number of Sequences: 237096
Number of extensions: 787717
Number of successful extensions: 1042
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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