Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26m17
(733 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 31 0.22
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.90
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 28 1.2
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 28 1.2
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 28 1.2
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 28 1.2
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 28 1.6
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 28 1.6
SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyc... 27 3.6
SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizos... 27 3.6
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 26 4.8
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 4.8
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 4.8
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 6.4
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 26 6.4
SPBC16D10.02 |trm11||tRNA |Schizosaccharomyces pombe|chr 2|||Manual 26 6.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 6.4
SPAC11D3.01c |||conserved fungal protein|Schizosaccharomyces pom... 25 8.4
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 30.7 bits (66), Expect = 0.22
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 586 WIASIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTASH 732
+I S S LG +++G + + GR+ + ++ ++VG I+ TA H
Sbjct: 131 FITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHH 179
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 0.90
Identities = 26/89 (29%), Positives = 40/89 (44%)
Frame = +1
Query: 184 SASISGQSQIIKTTHRLSKLIKDNMKCDGAHEAMLGNDKLAKIAKQKQKESNKQDEYEAL 363
S+S SGQ + + R SK + K D HEA K + K E +K+D+ +
Sbjct: 576 SSSKSGQGSSL--SRRASKH-ESKHKRDSKHEAR-PESKHESHRESKSAEKDKKDKKDKK 631
Query: 364 QSFLRSISSTATLPPYVKGETYSSVRGVF 450
+ RS S + + P K T++ G F
Sbjct: 632 EDSKRSRSHSVSKPDSSKLRTWTDRTGAF 660
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 622 GSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTA 726
G +S P+M+ IG+R ++ T+ ++G I+ TA
Sbjct: 72 GCFLSSPLMDRIGKRTSIMFWTIVYLIGIILQVTA 106
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 589 IASIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTA 726
I + + + G ++S P+M+ IG+R ++ T+ ++G I+ TA
Sbjct: 61 ITGMVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGIILQVTA 106
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 604 SAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTA 726
+A G+M+S P EAIG++ ++ + ++G I++ TA
Sbjct: 66 NAGCLFGAMLSSPFTEAIGKKYSIAFFSGCYIIGQILLVTA 106
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 281 RCSAMTNWRKSLNKSRKNQINRTNTKP 361
R + + NW+ L+K++KN + + N KP
Sbjct: 179 RDNRVGNWQDFLHKTKKNNLKKKNKKP 205
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 337 NKQDEYEALQSFLRSISSTATLPPYVKGE-TYSSVRGVFNQCLI 465
N D + L + LRSI A+LP + K +YS+ F Q L+
Sbjct: 91 NNVDSWNVLTNLLRSIDPEASLPKFDKDSISYSTTIDRFKQNLL 134
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 589 IASIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTA 726
I SI+ + M+S P+ E GRR LQ V +V + G A
Sbjct: 87 ILSIYLLVFAISPMISAPLSEVFGRRMLLQVGNVIFIVFNMACGLA 132
>SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 431
Score = 26.6 bits (56), Expect = 3.6
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 393 GHITTIRQRRNILFRSGCIQSVPHNMCSVDPCRRCGSSYRFLSDCS 530
GH T Q +NI+ +GC +P SVD SS +F+SD S
Sbjct: 142 GHGDTQWQAKNIIITTGCQPYIPPLYKSVDSPLIVHSS-KFMSDHS 186
>SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 184 SASISGQSQIIKTTHRLSKLIKD 252
S S G SQ IKT H + L+KD
Sbjct: 358 SISFKGPSQTIKTHHNVGGLLKD 380
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 26.2 bits (55), Expect = 4.8
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 260 NAMEPTKRCSAMTNWRKSLNKSRKNQINRTNTKPYRVSC 376
N+M P +C+A T+W + +++ ++ TK + C
Sbjct: 385 NSMNPLTKCAAQTSWIRLIHEFSLSETLTQATKRLTLLC 423
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 121 LKSDFVQNIVNDRSMGLADEPVFTPWRPTA 32
+K++ Q +VN S L D+ TP PTA
Sbjct: 1129 VKAEMTQPVVNQDSHDLQDQLATTPTAPTA 1158
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 121 LKSDFVQNIVNDRSMGLADEPVFTPWRPTA 32
+K++ Q +VN S L D+ TP PTA
Sbjct: 1129 VKAEMTQPVVNQDSHDLQDQLATTPTAPTA 1158
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 6.4
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 265 DGAHEAMLGNDKLAKIAKQKQKESNKQDEYEALQSFLRSISSTATLPPYVKGETYSS 435
D A N+ +A+ A+ K+ E +D Y +S + +++ + PP YSS
Sbjct: 379 DAVKAAEKRNETIAEAARAKENE--AKDLYSKAESITQDLNAKRSHPPQPANLDYSS 433
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 716 IMIHPTTSGTVQDCSVRRRPMASITGPD 633
IM H TS + S+ +RP+ASI D
Sbjct: 525 IMYHAFTSSIIIFISILKRPLASICSED 552
>SPBC16D10.02 |trm11||tRNA |Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 241 LIKDNMKCDGAHEAMLGNDKLAKIAKQKQKESNKQ-DEYEALQSF 372
L+ D + CD + G K+AK +++ KES+ + Y L+ +
Sbjct: 310 LLLDAIVCDPPYGVRAGAKKIAKCSQRPPKESSSTGNHYPKLEQY 354
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 6.4
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -3
Query: 704 PTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEW---ILAIQEPISSSVLIELFSRCS 537
P+TS + S+ PM S+ + P ++++ I I ISSS + FS S
Sbjct: 519 PSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVS 577
>SPAC11D3.01c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 79
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 268 GAHEAMLGNDKLAKIAKQKQKESNKQDEYE 357
G H+A L N +++ KQ++KE ++ E E
Sbjct: 9 GGHKAALHNPNVSEETKQREKEYLEEHEGE 38
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,268,283
Number of Sequences: 5004
Number of extensions: 71075
Number of successful extensions: 250
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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