Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26m17
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical pr...    34   0.12 
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr...    31   0.64 
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr...    31   0.64 
AL021497-13|CAA16411.2|  550|Caenorhabditis elegans Hypothetical...    30   1.9  
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AC006684-2|AAF39959.1|  116|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical
           protein M01F1.5 protein.
          Length = 604

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 19/76 (25%), Positives = 33/76 (43%)
 Frame = +1

Query: 499 GHPIGFSAIALPQLQRENSSMRTDDEMGSWIASIHSAATPLGSMVSGPVMEAIGRRRTLQ 678
           G+  G  + A+  +   +     D      I SI      +GS+ SGP  + +GR++ + 
Sbjct: 43  GYDTGIVSAAMLYVPNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPGSDFLGRKKIII 102

Query: 679 SCTVPLVVGWIIIGTA 726
             +V   +G II   A
Sbjct: 103 GASVTFTIGAIICAAA 118


>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
           protein F15G9.4b protein.
          Length = 5198

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = +3

Query: 555 LYENRRRDGLLDRQYPLGSYPSRLDGVRSGDGSHRAAADATVLHRPAGRWVD 710
           +YE R R G + R  P+  + S L    SGD       D  VL  P GR VD
Sbjct: 219 MYEARERGGTVSRNIPVDKHLSELTISLSGDKDDSDNLD-IVLRDPEGRTVD 269


>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
           protein F15G9.4a protein.
          Length = 5175

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = +3

Query: 555 LYENRRRDGLLDRQYPLGSYPSRLDGVRSGDGSHRAAADATVLHRPAGRWVD 710
           +YE R R G + R  P+  + S L    SGD       D  VL  P GR VD
Sbjct: 219 MYEARERGGTVSRNIPVDKHLSELTISLSGDKDDSDNLD-IVLRDPEGRTVD 269


>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
           protein F15G9.4b protein.
          Length = 5198

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = +3

Query: 555 LYENRRRDGLLDRQYPLGSYPSRLDGVRSGDGSHRAAADATVLHRPAGRWVD 710
           +YE R R G + R  P+  + S L    SGD       D  VL  P GR VD
Sbjct: 219 MYEARERGGTVSRNIPVDKHLSELTISLSGDKDDSDNLD-IVLRDPEGRTVD 269


>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
           protein F15G9.4a protein.
          Length = 5175

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = +3

Query: 555 LYENRRRDGLLDRQYPLGSYPSRLDGVRSGDGSHRAAADATVLHRPAGRWVD 710
           +YE R R G + R  P+  + S L    SGD       D  VL  P GR VD
Sbjct: 219 MYEARERGGTVSRNIPVDKHLSELTISLSGDKDDSDNLD-IVLRDPEGRTVD 269


>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
           precursor protein.
          Length = 5198

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = +3

Query: 555 LYENRRRDGLLDRQYPLGSYPSRLDGVRSGDGSHRAAADATVLHRPAGRWVD 710
           +YE R R G + R  P+  + S L    SGD       D  VL  P GR VD
Sbjct: 219 MYEARERGGTVSRNIPVDKHLSELTISLSGDKDDSDNLD-IVLRDPEGRTVD 269


>AL021497-13|CAA16411.2|  550|Caenorhabditis elegans Hypothetical
           protein Y51A2D.18 protein.
          Length = 550

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = +1

Query: 622 GSMVSGPVMEAIGRRRTLQSCTVPLVVGWIII 717
           GS+V G + ++ GR+   Q  ++ +++GW+I+
Sbjct: 142 GSIVFGQISDSFGRKIGSQVASLGMLIGWLIV 173


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 378 QYQLNGHITTIRQRRNILFRSGCIQSVPHNMC 473
           Q  ++ H+ +     +  +   CIQS PHN+C
Sbjct: 831 QMSVHTHLLSCNFESDCPYSHDCIQSTPHNLC 862


>AC006684-2|AAF39959.1|  116|Caenorhabditis elegans Hypothetical
           protein T02H6.10 protein.
          Length = 116

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 332 NQINRTNTKPYRVSCAVSAQRP 397
           N  N+TNT  YRV C     +P
Sbjct: 39  NNANKTNTDTYRVECGYELHKP 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,605,173
Number of Sequences: 27780
Number of extensions: 428798
Number of successful extensions: 1309
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)