Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26m11
         (671 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   4.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   4.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   4.6  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   4.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   4.6  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   4.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   8.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   8.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   8.1  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 474 VFNVTSRCLNRWYQICMCF 418
           V N+T+  +N W  +CMCF
Sbjct: 357 VSNLTA--MNVWDGVCMCF 373


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 474 VFNVTSRCLNRWYQICMCF 418
           V N+T+  +N W  +CMCF
Sbjct: 326 VSNLTA--MNVWDGVCMCF 342


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 474 VFNVTSRCLNRWYQICMCF 418
           V N+T+  +N W  +CMCF
Sbjct: 377 VSNLTA--MNVWDGVCMCF 393


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 474 VFNVTSRCLNRWYQICMCF 418
           V N+T+  +N W  +CMCF
Sbjct: 326 VSNLTA--MNVWDGVCMCF 342


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 508 WLKKNLLPVTEVNDNIVFGNVTII 579
           W+   L+ +  VN  +V GNV +I
Sbjct: 64  WILVTLIVLAIVNVMVVLGNVLVI 87


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 481 VDRKSNLISWLKKNLLPV 534
           +DR   ++ W +KN+L V
Sbjct: 50  LDRLQRVVDWFRKNMLLV 67


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 107 KQYIIYCPNCSLNFQKY 157
           K Y I CP  S+NF  +
Sbjct: 185 KVYYISCPEISVNFAHF 201


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 442 PIQTPASYVEDISVDRKSNLISWLKKN 522
           P +TP  + + +S    S+  +WL+ N
Sbjct: 415 PARTPFQWDDSVSAGFSSSSNTWLRVN 441


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 405 YCMAGYNHCVVCAVICY 355
           Y   G +HCVVC    Y
Sbjct: 186 YSETGPSHCVVCQNFFY 202


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 442 PIQTPASYVEDISVDRKSNLISWLKKN 522
           P +TP  + + +S    S+  +WL+ N
Sbjct: 415 PARTPFQWDDSVSAGFSSSSNTWLRVN 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,075
Number of Sequences: 438
Number of extensions: 3992
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)