Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26m10
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070575-1|AAL48046.1|  532|Drosophila melanogaster RE12073p pro...   133   2e-31
AE014297-1620|AAN14341.1|  532|Drosophila melanogaster CG12360-P...   133   2e-31
AE014297-1619|AAF54893.1|  532|Drosophila melanogaster CG12360-P...   133   2e-31

>AY070575-1|AAL48046.1|  532|Drosophila melanogaster RE12073p
           protein.
          Length = 532

 Score =  133 bits (322), Expect = 2e-31
 Identities = 62/153 (40%), Positives = 99/153 (64%)
 Frame = +2

Query: 221 DVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSX 400
           +  Q+LP + TLL     + V L+GT HFS++S +DVS +++ + P+ ++VELC  R+  
Sbjct: 233 EFEQNLPSTVTLLNTPFGSKVYLVGTAHFSEESQDDVSYVIRNVRPDVVMVELCPSRIHI 292

Query: 401 XXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRA 580
                      AK+ +  K++  +     + G+   +LL+  A IAK+LG+APGGEFRRA
Sbjct: 293 LKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGMAPGGEFRRA 352

Query: 581 YHEMQKIPGCKLYLGDRPIQITIARAFQSLSVY 679
           + E+ K+PGC L+LGDRPI+IT+ RA ++LS++
Sbjct: 353 FEEIHKLPGCILHLGDRPIRITLYRALRALSMW 385


>AE014297-1620|AAN14341.1|  532|Drosophila melanogaster CG12360-PB,
           isoform B protein.
          Length = 532

 Score =  133 bits (322), Expect = 2e-31
 Identities = 62/153 (40%), Positives = 99/153 (64%)
 Frame = +2

Query: 221 DVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSX 400
           +  Q+LP + TLL     + V L+GT HFS++S +DVS +++ + P+ ++VELC  R+  
Sbjct: 233 EFEQNLPSTVTLLNTPFGSKVYLVGTAHFSEESQDDVSYVIRNVRPDVVMVELCPSRIHI 292

Query: 401 XXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRA 580
                      AK+ +  K++  +     + G+   +LL+  A IAK+LG+APGGEFRRA
Sbjct: 293 LKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGMAPGGEFRRA 352

Query: 581 YHEMQKIPGCKLYLGDRPIQITIARAFQSLSVY 679
           + E+ K+PGC L+LGDRPI+IT+ RA ++LS++
Sbjct: 353 FEEIHKLPGCILHLGDRPIRITLYRALRALSMW 385


>AE014297-1619|AAF54893.1|  532|Drosophila melanogaster CG12360-PA,
           isoform A protein.
          Length = 532

 Score =  133 bits (322), Expect = 2e-31
 Identities = 62/153 (40%), Positives = 99/153 (64%)
 Frame = +2

Query: 221 DVSQHLPKSATLLQNDKQATVVLLGTVHFSKQSIEDVSEIVKILNPNGILVELCRQRVSX 400
           +  Q+LP + TLL     + V L+GT HFS++S +DVS +++ + P+ ++VELC  R+  
Sbjct: 233 EFEQNLPSTVTLLNTPFGSKVYLVGTAHFSEESQDDVSYVIRNVRPDVVMVELCPSRIHI 292

Query: 401 XXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGVAPGGEFRRA 580
                      AK+ +  K++  +     + G+   +LL+  A IAK+LG+APGGEFRRA
Sbjct: 293 LKLDEKTLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGMAPGGEFRRA 352

Query: 581 YHEMQKIPGCKLYLGDRPIQITIARAFQSLSVY 679
           + E+ K+PGC L+LGDRPI+IT+ RA ++LS++
Sbjct: 353 FEEIHKLPGCILHLGDRPIRITLYRALRALSMW 385


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,348,706
Number of Sequences: 53049
Number of extensions: 593174
Number of successful extensions: 1113
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)